Heliomicrobium modesticaldum: HM1_0813
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Entry
HM1_0813 CDS
T00653
Symbol
dnaX
Name
(GenBank) DNA polymerase iii gamma/tau subunit
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
hmo
Heliomicrobium modesticaldum
Pathway
hmo03030
DNA replication
hmo03430
Mismatch repair
hmo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hmo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HM1_0813 (dnaX)
03430 Mismatch repair
HM1_0813 (dnaX)
03440 Homologous recombination
HM1_0813 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hmo03032
]
HM1_0813 (dnaX)
03400 DNA repair and recombination proteins [BR:
hmo03400
]
HM1_0813 (dnaX)
Enzymes [BR:
hmo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HM1_0813 (dnaX)
DNA replication proteins [BR:
hmo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HM1_0813 (dnaX)
DNA repair and recombination proteins [BR:
hmo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HM1_0813 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA_22
AAA_30
RuvB_N
AAA_5
TIP49
AAA_19
ResIII
AAA_24
AAA_7
AAA_18
AAA_14
AAA_2
AAA_16
Mg_chelatase
Rad17
SRP54
PIF1
AAA_assoc_2
AAA_6
AAA_11
nSTAND3
RNA_helicase
End3
DUF815
DEXQc_Suv3
ABC_tran
AAA_28
AAA_33
TsaE
DUF3138
Motif
Other DBs
NCBI-ProteinID:
ABZ83743
UniProt:
B0TAU1
LinkDB
All DBs
Position
1183940..1185760
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AA seq
606 aa
AA seq
DB search
MAYLALYREWRPQSFQELVGQEHVSRTLQNAIAYQRIAHAYLFCGPRGTGKTTTAKILAK
ALNCSGHGPVRPCNDCLNCRAINTGASHDVLEIDAASNRGVDEIRELREQVKYAPQEGNY
KVYIIDEVHMLTTEAFNALLKTLEEPPANVIFVLATTEVHKIPATILSRCQRFDFRRLGV
NEIVDRLERICRHHEIAASRETLSFIARKAEGGMRDALGILDQCVSYAGNEIDSGDVTAI
LGAVADEILYDMTQGLAEDRLSDVLMQLNDLINRGKEVRPLTRDLLGHYRDRLILRTVPG
AADLVDMPDDIAAKVKETGHVYSVSDLQACIALLSQAENDMKWTTHPRILLEVAFVRIAC
REWGKGAGNAPASPTSGGAGGAADMEMRALRRRVESLEAKVREMQQAVENQGAASGEKRP
SLDSEALRRPQPAMPSATISKLDEETKAAARLAEGPIHIDQVNACWPNVLAAALERISPL
KRSILRGQTRLAGVELNRVVLVHNNTLYDQPNDPKLSDVVNALKEEFSKALGRPVSIQLC
HESQWKPGGERQQRQRGGAPPAPAKAAGTGGATPPWADPAYIRDKVFQDPNLPVEFDDDD
RLDGLE
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggcctatctggcgctttaccgagagtggcgaccccagagctttcaggaactggtcggc
caggagcatgtgagccggaccttgcagaatgccatcgcctaccagcggatcgcccatgcc
tacctcttttgcggccctcgggggacaggaaagacgacgacggccaagatcctggccaag
gcgctcaattgcagcggccatggcccggtgagaccctgcaacgactgccttaactgccgc
gccatcaacacgggcgcctcccacgacgtgctggaaatcgacgcggcgtccaaccggggc
gtcgatgagatccgcgagttgcgcgaacaggtcaagtacgcgccccaagaggggaactac
aaggtctacatcatcgacgaagtccacatgctgacgacggaggccttcaacgccctcttg
aagacgctggaggagccgccggccaatgtgatctttgtgctggctacgacagaggtgcac
aagatcccggccaccatcctctcccgctgtcagcgctttgactttcgccgcctcggtgtc
aacgagatcgtcgaccgtctggagcggatctgccgccatcacgagatcgcggcctcccgc
gagacgctgtcctttatcgcccgcaaggccgaagggggtatgcgggacgccctggggatt
ctcgatcagtgcgtctcttacgccgggaacgagatcgacagcggtgatgtgacggccatc
ttgggcgctgtcgccgatgagatactctatgacatgacccagggtttggcggaagatcgg
ctctccgatgtgctgatgcagctgaatgatctgatcaaccggggcaaagaggtgcggccg
ctgacgcgggatctgctcgggcactaccgggaccggttgatcctgcggacggtgccgggc
gccgccgatctggtggacatgcccgacgacatcgccgcaaaggtcaaagaaacaggccac
gtctacagcgtatccgacctgcaggcctgcatcgccctgttgagccaggccgaaaatgac
atgaaatggacaacccatccgcgcatcctgctggaggtggcctttgtccgcatcgcctgc
cgagagtgggggaaaggcgccggcaacgcgccggcgtcaccgacttcgggcggggccggc
ggcgctgctgacatggagatgcgcgccctccgtcggcgggtggaaagcctcgaggccaag
gtgcgggagatgcagcaggcagttgagaatcaaggcgcggcttccggggaaaagcgccct
agcctagattcggaggcgcttcggcgcccacagcctgcgatgccctcagcaaccatctcc
aagctggatgaggagacgaaagcggcagcccggcttgccgaagggccgatccatattgac
caggtcaacgcctgctggcccaatgtgctcgctgccgcgctggagcgcatttccccgttg
aaacgctccatcctgcgtggacagacgcgtttggctggcgttgaactgaaccgggtcgtc
ctggtccataacaacaccctctatgaccagcccaacgatccgaaattgagcgatgtggtg
aacgctctcaaggaggagttttccaaggccctgggcaggccggtgtcgattcaactctgc
catgaaagccagtggaagcccggaggggaacggcagcagcggcaaagagggggggctcct
ccggcgccggcgaaggcggcgggaacaggcggcgcgaccccaccctgggctgacccggcc
tatatccgtgacaaggtttttcaagatcccaacctgccggtggaatttgacgacgacgac
aggttggatgggctggaatag
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