Heliomicrobium modesticaldum: HM1_0882
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Entry
HM1_0882 CDS
T00653
Symbol
gyrA
Name
(GenBank) DNA gyrase, a subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
hmo
Heliomicrobium modesticaldum
Brite
KEGG Orthology (KO) [BR:
hmo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hmo03032
]
HM1_0882 (gyrA)
03400 DNA repair and recombination proteins [BR:
hmo03400
]
HM1_0882 (gyrA)
Enzymes [BR:
hmo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HM1_0882 (gyrA)
DNA replication proteins [BR:
hmo03032
]
Prokaryotic type
DNA Topoisomerases
HM1_0882 (gyrA)
DNA repair and recombination proteins [BR:
hmo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HM1_0882 (gyrA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
ABZ83683
UniProt:
B0TAN1
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Position
1116581..1119019
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AA seq
812 aa
AA seq
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MSDMVGKVVPIKLEEEMKKSFLDYSMSVIVSRALPDVRDGLKPVHRRILYTLYETGRAPD
KPYSKSAGLVGDVMGRYHPHGDSAIYDATVRLAQDFSTRYMLIDGHGNFGSIDGDPAAAM
RYTELRMAKITSYILADIDKNTVDFKPNYDDKREEPTVLPSRVPNLLLNGSSGIAVGMAT
NIPPHNLAEIIDAVIMMIENPKATVEDLMRVVKGPDFPTGALIMGREGIRQAYTTGRGSI
IMRAKARIEKMNGNKMRILVHEIPYQVNKSKLLERIAELVRDKRVDGITDLRDESDRRGM
QIVIELRRDVNPQIVLNQLFKYTQMQETFGVIMLALVDGVPKVLNLRDMLYYYLEHQKDV
IVRRTRYDLEKAEARAHILEGLRIAIDNIDRIIEIIRTSRDEDEARPILMGEFNLSEKQA
QAILDMRLKRLAGLEREKIENEYQELLSSIAYYRAVLHSEKMVLDIIKKEISEIKEKFAD
PRRTEITSSGADIDVEDLIAEEDAVITITHNGYIKRLPVNTYKAQRRGGRGVTGMGTKED
DFVEHLFVTTTHHTLLFFTDRGKVYRLKTHEIPEASRTAKGTAIVNLLAITGDEKVNAVI
PVKEFAADQYLFTATRSGIVKKTSLQHYDTVRKEGLIALTLDEGDELIGVKLTDGKSDIL
LATRNGMAVRFNETNVREMGRTARGVKGIELTQGDFVVALDAVKDDDELLMITELGMGKR
TPLSEYRKQNRGGKGILAMRLTNKTGLMAGIKVVRPGDELMVISAEGVIIRLNVDEINVL
SRVTQGVSIMRMNANDKVVALARVAMREEDEE
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatatggtcggaaaagtcgtccccatcaaacttgaagaggagatgaaaaaatcc
ttcctcgactactcgatgagcgtcatcgtctcccgtgcgctgcctgacgtgcgggacggg
ttgaagcctgttcatcgtcggattctttataccctctacgagacgggcagggcgccggac
aagccctacagcaagtcggctggtctcgtcggcgacgtcatgggccgctaccaccctcac
ggcgattcggccatctatgacgccacggtacgtttggcccaggatttttccacacgctac
atgctgatcgacggccatggcaacttcggctccatcgacggcgacccggcggcggccatg
cggtacacggaattgcgcatggccaagatcacgagctacatcctggctgatatcgataaa
aacaccgtcgacttcaaacccaactatgacgacaagcgggaggaaccgactgtcttgccg
tcacgggtgcccaatctgctcttaaacggctcctcgggcatcgccgtcggcatggccact
aacattccgcctcacaatctggcggagatcatcgacgctgtcatcatgatgatcgaaaat
ccgaaggcgaccgtggaagatctgatgcgggttgtcaagggccccgacttccccaccggc
gctctgatcatgggacgggagggcatccgccaggcctacacaacaggccgcggctccatc
atcatgcgcgccaaggctcgcattgaaaagatgaacggtaacaagatgcgcatcctcgtc
catgagattccctaccaggtgaataagtcgaagctcctggagcgtatcgccgaactggtt
cgggacaagcgggttgatggcatcactgatttgcgcgacgaatctgatcgtcggggcatg
cagatcgtcatcgaactgcgccgcgacgtcaacccgcagatcgtcctcaaccagctcttc
aaatatacccagatgcaggagacctttggcgtcatcatgctggccctcgtcgacggtgtg
cccaaggtgctcaatctgcgcgacatgctctactactatttggagcaccagaaagacgtc
atcgtccgccggactcgctacgacctggagaaggccgaggcccgcgctcacatccttgaa
ggcttgcgcatcgccattgacaacatcgaccgcatcatcgagatcatccgcacctcccgg
gacgaggatgaagcccgtcccatcttgatgggagaattcaatctcagcgagaagcaggcc
caggccattttggacatgcgcctcaaacgcctggccggtctggagcgggaaaaaatcgag
aacgagtaccaggagctgttatcgagcatcgcctattatcgcgctgtcctccattcggag
aagatggtcctggacatcatcaaaaaagagatctccgagatcaaagaaaaattcgccgat
ccccgccgcactgagatcaccagcagcggcgccgacatcgatgtggaagacctgatcgcc
gaagaagacgctgtcatcaccatcacccacaacggctacattaaacgcctgccggtcaat
acatacaaggcccagcgccggggcggccggggcgtcaccgggatggggacgaaagaggat
gacttcgtcgagcacctcttcgtcaccaccacccatcatacgctgcttttcttcaccgac
cggggcaaggtctaccgcttgaagacccacgagatccctgaggcgtcgcggacggctaag
gggacagccatcgtcaacctgttggcgatcaccggcgatgaaaaggtcaacgccgtcatt
cctgttaaggaatttgctgccgaccagtacctcttcacggcgacccgcagcggcatcgtc
aagaagacttcccttcagcactatgacacggtgcgcaaagaaggattgatcgctttgacc
cttgatgagggcgacgaactgatcggcgtcaagctcaccgacggaaagagcgatatcctg
ctggcgacccgcaacggcatggcagtccgcttcaatgagacgaatgtgcgcgagatgggc
cggacggctcgcggcgtcaaagggatcgaactgacccaaggtgattttgtcgtcgctctt
gatgcagtcaaggatgacgatgagttgctgatgatcaccgaactcggcatgggcaaacgc
acccctctctcagaataccgcaagcaaaatcggggcggcaagggcatcctggccatgcgt
cttaccaacaagacgggcttgatggccggcatcaaggtggtccgtcccggcgacgagctc
atggtcatctccgccgagggtgtcatcatccgcctgaacgtcgatgagatcaacgtcctc
agccgcgtcacccagggcgtgagcatcatgcggatgaacgccaacgacaaggtggtcgcc
ctcgcccgggtagccatgcgggaagaggatgaagagtag
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