Heliomicrobium modesticaldum: HM1_1588
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Entry
HM1_1588 CDS
T00653
Symbol
sbcD
Name
(GenBank) exonuclease sbcd
KO
K03547
DNA repair protein SbcD/Mre11
Organism
hmo
Heliomicrobium modesticaldum
Brite
KEGG Orthology (KO) [BR:
hmo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hmo03400
]
HM1_1588 (sbcD)
DNA repair and recombination proteins [BR:
hmo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HM1_1588 (sbcD)
Archaeal homologous recombinant proteins
HM1_1588 (sbcD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
ABZ84158
UniProt:
B0TDB7
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All DBs
Position
1601131..1602294
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AA seq
387 aa
AA seq
DB search
MRILHTADWHLGRIFHQVHMTEDQAAVLDQFIDLIKDRRPHAVIVAGDIYDRSVPPVDAV
RLLDEVITRILLDHRTAVIMVAGNHDSADRLGFGNRLFAGRGFHLFGRLDRDMAPIPVED
ETGPVWFCPIPYAEPALVRETFGSSPEAVRGHNEALRVLADHMSARTPAGARRIAVAHAF
VTGGEQSESESFLTVGGAGTVDGSIFEGFHYTALGHLHRPQHCGHDRIRYSGSLLKYSFS
EADHQKGITFVELDGAGQITACESIALTPRRDVRRLEGYLNDILKGAAPGENRQDYVMVT
LLDEGAILDPIGKIRQVYPNVLHIQRTFLERGSGAVRSVGDHRRLDDLDLFASFMEQVTG
SPLDEEGRQVAADVIDDVLGRCREVAP
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcattctacatacggctgactggcatctgggccgcatctttcatcaggtgcacatg
acagaggaccaggccgctgtgctggaccagtttatcgatctgatcaaggataggcgaccc
catgccgtcattgtcgccggcgatatctatgaccgttcggtgccgcccgttgacgccgtt
cgattgttggacgaggtgatcacccgcatcctgctcgaccaccgcacggcggtcatcatg
gtagccggcaaccatgacagcgccgaccggctcgggttcggcaaccggcttttcgcgggg
cggggcttccatctgttcggtcgcttggatagagacatggcgcccatcccggtcgaggat
gaaacaggccctgtctggttttgccccatcccctatgcggaacctgcccttgtgcgggag
acctttggatcatccccggaagcggtgcgcggtcacaacgaggccttgcgcgtcctcgcc
gatcacatgagcgcccggacgcccgccggcgcgcgcaggatcgccgtagcgcatgccttt
gtcaccggcggcgagcagagtgaatcggaaagtttcctcaccgtcggaggcgccggaaca
gtcgatggcagcatctttgagggctttcactacaccgccttggggcacctgcaccgtccg
cagcactgcggccacgatcggatccgctacagcggctccctgctcaagtattccttttcc
gaagcggatcaccaaaaggggatcacctttgtcgagctcgatggcgccgggcaaatcacc
gcatgtgagtcgatcgccctgacaccccggcgagatgtgcgtcgcctggagggatacctc
aatgatatcttgaagggagcagcgccaggagaaaaccgccaggactatgtcatggtcacc
ctgctcgatgagggcgccatcctcgatcccatcggcaagatccgccaggtttaccccaat
gtgcttcacatccaacggaccttcctcgaaagagggagtggggctgtgcggtctgtcggc
gaccaccggcgcctggacgacctggatctgttcgcttcttttatggaacaagtgaccggt
tccccccttgatgaggaaggacggcaggtggcggcggacgtgatcgacgacgtgttggga
cggtgccgggaggtggccccatga
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