Heliomicrobium modesticaldum: HM1_2053
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Entry
HM1_2053 CDS
T00653
Symbol
spoVD
Name
(GenBank) stage v sporulation protein d
KO
K08384
stage V sporulation protein D (sporulation-specific penicillin-binding protein)
Organism
hmo
Heliomicrobium modesticaldum
Pathway
hmo00550
Peptidoglycan biosynthesis
hmo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hmo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HM1_2053 (spoVD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hmo01011
]
HM1_2053 (spoVD)
Peptidoglycan biosynthesis and degradation proteins [BR:
hmo01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
HM1_2053 (spoVD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PASTA
Motif
Other DBs
NCBI-ProteinID:
ABZ84610
UniProt:
B0TGB4
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All DBs
Position
2049968..2052118
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AA seq
716 aa
AA seq
DB search
MFATPVQVRKRTTQVFLFFTVLVGILILRLFWVQVVNGAFYSAKAEEVRLRALPVEAKRG
TIYDRNMNSLAVSVSVDSVVANPREVNGSERGREIAAELARVLELDQERVFKLITQPDVG
FVWVKRKVEPDKIEQLRNSPVKLTGISYIPESKRYYEKGKLASHILGITDTDARGLEGLE
LYFDQDLRGLPGKLVAEYDARNREMPQAEHVFIRPVDGHSLVLTIDETVQYIVERELDKL
ERERKPKGATIIVMDVKTGRILGMSNRPTFDPNDRGKYPDSARRSRAISDAYEPGSTFKI
ITASAALEEGAVKESDRFFDPGYAIVGDRRVRCWKDGGHGAQSFTEVVQNSCNPGFIQIG
MNLGLPKFYNYLRAFGFGQPTGITLNGEAAGILVPEKTAKPIDLATMSIGQANAVTPIQL
ITAVSAVANGGKLMKPQLVEKILDAQGSVIKTFEPEVVRQVVSKETAEKVNLILEKVVSK
GTGINAYIEGHRVGGKTGTAQKIKPGGGYMEGEYVASFVGIAPANDPVIACLVVVDAPQG
EPHFGGLVAAPIFKAVVADVLRHLGIQPQVLPGEVPAVAADGLKEIAVPQVTGLSEEEAE
QRVMRVGLSVATEGFGVRVVNQSPQPGAKVAPQTAVILYLGDDEKAARAAPGEEVICPDV
TGKGIKQAGDLLAKAGLSFEPVGSGLAKGQSVKGGRKVPVGTVVRVEFAPVDESGP
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgccacaccggtacaggtgcgtaaacgaacgacacaggttttcctgtttttcacc
gtactggtcggcatcctgatcctacgtctcttttgggttcaggtcgttaacggtgccttt
tactcggccaaggccgaggaggttcgcctgcgtgctctgccggtggaagcaaaacgggga
accatttacgatcgcaacatgaattcgctcgccgtgtcggtgagcgttgattctgtcgtc
gccaacccgcgagaggtgaatggttcggaacgggggagagagattgccgccgaactggca
cgcgttctcgagctggatcaggaacgggtgttcaagctgatcacgcagccggacgtgggc
ttcgtctgggtcaaacggaaagtggaacctgataagatcgagcagctgcgtaactcgcca
gtcaagctgaccggcatcagctatatcccggaaagcaagcgctattacgaaaagggcaaa
ctggcctcgcacatcttggggatcaccgatacggacgcccgaggcctggaggggcttgaa
ctgtactttgaccaggatctgcgcggtctgccgggcaagctggtggccgagtatgacgcc
cgcaaccgcgaaatgccccaggccgaacacgtctttatacgccctgtcgacgggcatagc
ctcgtgttgaccatcgatgagacggtccagtacatcgtagaacgggaactggataagctc
gaacgagaacgaaagcccaaaggcgccaccatcatcgtcatggacgtgaagaccggccgc
atcctgggcatgtcgaaccgtcccacctttgatcccaatgaccgtggcaagtatcccgat
tctgcccgccgcagccgggcgatcagcgacgcctatgagcccggttccaccttcaagatc
atcaccgccagcgccgccctggaagagggcgccgtcaaggaatcggatcgcttttttgac
cccggctacgcgatcgtcggtgaccgccgcgtgcgctgctggaaagacggcggccacggc
gcccagagctttaccgaggtggttcaaaactcctgtaacccgggcttcatccagatcggc
atgaatctcggtctccccaagttttacaactacctgagggctttcggcttcggccagccg
acagggatcaccctgaacggggaggcagcgggcatcctggtgccggagaagacggctaag
ccgatcgacctggccaccatgtctatcggtcaggcgaatgccgttacaccgattcagctg
atcaccgctgtgtcggcggtggccaacggcgggaaactgatgaagcctcaactggtcgag
aagatcctcgacgcccagggttcggtgatcaagaccttcgagcctgaggtcgtccgtcag
gtcgtatccaaggagacggcagaaaaggtcaacctgatcctggagaaggtcgtatccaag
gggacgggcattaacgcctacattgagggccaccgcgtgggcggcaaaacgggcacggcc
cagaagatcaagcccggcggcggttacatggagggcgagtatgtggcgtcttttgtcggc
atcgccccggccaacgatccagtcatcgcctgtctcgtcgttgtcgatgcgccgcaggga
gagcctcatttcggcggcttggtggcggcgcctatcttcaaggccgtcgtggccgatgtg
ctgcgccacctggggattcagccccaggtccttcccggtgaggtgccggcggtcgctgca
gacggtttgaaggaaatcgcagtcccgcaggtgaccggtctcagcgaagaggaagcggag
cagcgggtgatgcgcgtcggattgagcgtcgcgacggaaggcttcggcgtccgtgtcgtc
aatcagtctcctcaacccggtgccaaggtggcgccccagactgcggtcatcctttacctc
ggcgacgatgaaaaggcggcccgagctgcaccaggggaagaagtgatctgccccgacgtg
acgggaaaagggatcaaacaggctggcgatctgttggctaaagcgggtctctcctttgaa
ccggtcgggagcggtctggcgaaagggcagagcgtcaagggcggccgcaaggtgccggtg
gggacggtggttcgcgtcgaatttgcgcccgtcgacgaaagcggtccttga
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