Heliomicrobium modesticaldum: HM1_2057
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Entry
HM1_2057 CDS
T00653
Symbol
murD
Name
(GenBank) udp-n-acetylmuramoylalanine--d-glutamate ligase, putative
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
hmo
Heliomicrobium modesticaldum
Pathway
hmo00470
D-Amino acid metabolism
hmo00550
Peptidoglycan biosynthesis
hmo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hmo00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HM1_2057 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HM1_2057 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hmo01011
]
HM1_2057 (murD)
Enzymes [BR:
hmo01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
HM1_2057 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
hmo01011
]
Precursor biosynthesis
Amino acid ligase
HM1_2057 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
AlaDh_PNT_C
Pyr_redox
GIDA
Pyr_redox_2
Pyr_redox_3
XdhC_C
FAD_oxidored
DAO
NAD_binding_8
NAD_binding_7
HI0933_like
FAD_binding_3
ThiF
2-Hacid_dh_C
Peripla_BP_1
Motif
Other DBs
NCBI-ProteinID:
ABZ84614
UniProt:
B0TGB8
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All DBs
Position
2056605..2058002
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AA seq
465 aa
AA seq
DB search
MTNRWQDGRKTLVVGAGKSGIAAARTLARLGAAVTLCDTKTLEDLPFRKELEAAGVVLHG
GGYPSLREGGFREVVMSPGVPLTVPPAREAQEQGLAITGELEIAYCLSLAPFIAITGTNG
KTTTTSLVGAILKAAGRNPFVGGNIGQPLVEEAQRLTADRWVVAEVSSFQLETTDQFHPR
ASLILNITPDHLDRHGDMENYRAIKARIFRNQGSEDITVLNYDDPLVRTLAADCRSRVLF
FSRLQKMEHGAYVDGGMIRFAGPEGDMAVAAVDRLQIKGAHNVENALAACALTVGLGIAP
AVVAQAMIDFQPVEHRMEPVGTVEGVAYVNDSKGTNPDASIKAIESYDRPVILIAGGKNK
GSDFSELAEIIKKRVKAVVLVGQAAPVLEAALRKAGVEAIKLVDTFDATVLEAAQMAEPG
DVVLLSPACASLDMFPNYEVRGQVFKDLVRQLARDRRAEKDRPPC
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
ttgaccaaccgctggcaagacggacgcaaaacactggtcgtaggtgccggcaaaagcggc
atcgctgccgcccgcacactggcccgtttgggcgctgccgtcaccctttgcgatacaaaa
acattggaagacttgccgttccggaaagaactggaagcggccggcgtggtccttcacggc
ggcggttatccgtcccttcgggaagggggcttccgtgaagtcgtcatgagtcccggcgtt
cccctgaccgtgcctccggcgcgggaagcgcaggaacaggggctcgccatcacaggggaa
ctggagatcgcctactgcttgtccttagcgcccttcatcgccatcaccggcaccaacggc
aagacgacgacaacctcgctggtgggcgccatcctgaaggcagcaggccggaaccctttt
gtcggggggaacatcggccaaccgctcgtggaagaggcacagcgcctcaccgctgaccgc
tgggttgtggctgaggtctcttccttccagttggagacgaccgatcagtttcatcctcgc
gcttctttgatcctgaacatcacccctgaccacctcgaccgtcacggcgacatggaaaac
taccgcgccatcaaagcgcgcatcttccgaaaccagggtagtgaggatatcaccgtcctc
aactacgacgatccgctggtgcgaacactggcagctgactgtcggagccgagtccttttt
ttcagccggctgcagaagatggaacatggcgcttatgttgacggtggcatgatccgtttt
gcgggaccggagggtgacatggccgttgccgccgtcgatcgattgcagatcaaaggcgcc
cacaacgtggaaaacgccttggccgcctgtgctttaaccgtggggctcggcatcgcccct
gctgtggtcgcccaggcgatgatcgattttcagccggtcgagcaccgcatggagcctgtc
ggaacggtggagggcgtagcctatgtgaacgactcgaaagggacgaatcctgacgcttcc
atcaaagcgattgagtcctacgacaggccggtgatcctgatcgccggaggaaagaacaag
ggcagcgatttcagcgagctggcagaaatcatcaaaaaacgggtgaaggcggttgtcctt
gtcggccaggcagcgccggttcttgaagccgctctccggaaagccggcgtcgaagcgatc
aagcttgtagacacctttgacgcgactgttcttgaagctgcgcagatggctgagccgggc
gatgtggtcctcttgagtccggcctgcgccagtcttgacatgttcccaaactatgaggtg
cggggacaggtgtttaaggaccttgtccggcaattggcccgggatcgtagggctgaaaag
gatcggccgccctgctga
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