Heliomicrobium modesticaldum: HM1_2511
Help
Entry
HM1_2511 CDS
T00653
Name
(GenBank) sigma-54 dependent transcriptional regulator
Organism
hmo
Heliomicrobium modesticaldum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PAS
Sigma54_activ_2
PAS_9
HTH_8
PAS_4
PAS_8
Diguanyl_cycl_sensor
AAA_16
HTH_50
AAA
HTH_30
CCD48
UPF0175
HTH_29
Motif
Other DBs
NCBI-ProteinID:
ABZ85059
UniProt:
B0TAU8
LinkDB
All DBs
Position
2489334..2491055
Genome browser
AA seq
573 aa
AA seq
DB search
MQQRHEIVTQLFNWVAIINASHNPIIATDHEGLVRVFNKAASRAFGKETRDVIGMPFEAV
VPKCRLRETIQTGQPLTGLRFSYQERVFLVNLTPILRKQQLVGAVAIFQDMTELESVVEE
LNRVKELKGTLEAILEAAYDGIIVVNAEGIITMVNQACCNFLGFRESDLLGRHVANMVEG
TRMHIVLQTGQAEVGDLQRTGGHDYIAMRIPIVKDGQVVGAVGKIMFKNVNELNALASKI
NSLQKELHYYKEELQKYRGARYSFDAVVGTSYAIRMIKDTARQVARTDSIVLLRGENGTG
KQLLAHAMHIESERREGPFIQISCSGIRPESLEIELFGSAVDAPGASSSGKFALAHRGTL
YITDIGDMPLPAQARLFRLLQGQLPLVDSPDGPVIADVRLIVSTNRHLEEMVRKDLFRED
LYNRLNVISLFIPPLRDRKEDIPELVSLFIQNFNRQFGFSVQKVTREAMQVLINYHWPGN
VRELHSLIERIYDRVKGDTIDVGHLPMHLQKFNHTDATAPQSQSLQALLEETEKTAILQA
LQSANGNKVQAAQLLGISRAGLYQKLAKYQIEE
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
gtgcaacaacggcatgagatcgtcacccaactgttcaattgggtggccatcatcaatgct
tctcacaaccccatcatcgccactgaccatgaggggctggtgcgcgtcttcaacaaggcc
gcctcccgcgcctttggcaaagaaacccgcgacgtcatcggaatgccctttgaggctgtc
gtccccaagtgccgcctccgggagacgattcaaacgggccaacccctaactggcctgcgt
tttagctaccaggagcgggtctttctcgtcaacctgactcccatactgcgaaaacagcag
ctcgtcggcgccgtggcgatctttcaagacatgaccgagttggagtctgttgtggaggaa
ctcaatcgggtcaaggaattaaagggcaccctggaagcgatcttggaggccgcctatgac
gggatcatcgtcgtcaacgccgagggtatcatcaccatggtcaatcaagcctgttgcaat
ttcctcggttttcgcgagtccgatctgctgggccgccatgtggccaacatggtggagggg
acgcgcatgcatatcgtcttgcagacaggacaagccgaagtaggcgatttacagcgcacc
ggcggccatgactacatcgccatgcgcatccccatcgtgaaagatggacaggtcgttggg
gctgtcggcaagatcatgttcaaaaacgtaaatgaactgaacgcgctggcttcgaagatc
aattcccttcaaaaagaactccattactacaaggaagaactgcaaaagtaccggggcgcc
cgctacagctttgacgccgtagtcggaaccagctacgccatccggatgatcaaggatacg
gcccggcaggtggctcgcaccgattcgatcgtcctgctccggggagagaacggcacaggc
aaacaactgttggcccatgctatgcacatcgagtcagaacggagagaaggccccttcatt
caaatcagctgcagcggaatcagaccggagtccctcgagatcgaactattcggcagcgcc
gtcgacgcacccggggcatcatcgtcaggcaagtttgcccttgcccaccgggggacgctg
tacattaccgatatcggcgacatgccgctgcctgcacaagcccggttgttccggctgctg
caaggtcaattgcccctcgtcgacagccccgacggcccggtgatcgccgatgttcgactg
atcgtctcaacaaaccgccatctcgaggagatggtccgcaaagacctcttccgagaggat
ctctacaaccggttgaacgtgatcagcctcttcatcccgccgttgcgtgatcgcaaggag
gacatccctgaactggtctccctctttatccagaatttcaaccgccaatttggtttttct
gtccagaaggtgacacgggaagctatgcaggtcctgatcaactaccattggccgggtaat
gtgagggaactgcactcgttgatcgagcggatctacgaccgggtcaaaggcgacacgatc
gatgtaggccacctgcccatgcacctgcaaaaattcaaccacacggacgcgacagcgcct
cagtcacaaagcctgcaagccctcctggaagagacagaaaaaacggcgatcctgcaggcc
ttgcagtccgccaatggcaacaaggtgcaggcggcccaattgctcgggatttcccgtgcc
ggcctctaccagaagttggctaagtaccaaattgaagagtga
DBGET
integrated database retrieval system
