Heliomicrobium modesticaldum: HM1_3029
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Entry
HM1_3029 CDS
T00653
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase pcra
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hmo
Heliomicrobium modesticaldum
Pathway
hmo03420
Nucleotide excision repair
hmo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hmo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HM1_3029 (pcrA)
03430 Mismatch repair
HM1_3029 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hmo03400
]
HM1_3029 (pcrA)
Enzymes [BR:
hmo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HM1_3029 (pcrA)
DNA repair and recombination proteins [BR:
hmo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HM1_3029 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
HM1_3029 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
CatAgl_D1
RxLR_effector
CarD_TRCF_RID
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ABZ85536
UniProt:
B0TDL1
LinkDB
All DBs
Position
complement(2983318..2985513)
Genome browser
AA seq
731 aa
AA seq
DB search
MSTDFLHSLNPVQREAVLHQEGPLLLLAGAGSGKTRVLTHRIGHLIEQCRVSPFHILAIT
FTNKAAAEMRERLGRLIGPRAHDVWVSTFHSTCMRILRKDGEKLGYDRSFVIYDYDDQQR
LLKECLKELNIDEKRFKPQAVGAAISSAKNRLVGPVAFERQAYDHFAQISAKVYHIYQKK
LKAHNAMDFDDLLVNGVCLFREFPHVLDNYQDRFRYIHVDEYQDTNHAQYVLVKLLADKY
RNLCVVGDDDQSIYGWRGADIQNILDFERDYPEAVVLKLEQNYRSTGKILEAANAVVGNN
RGRKSKKLWTQNPSGQPIVAYQGETEHDEARYIVRTIKRLSESENRPYRDFAILYRTNAQ
SRVLEEHFMYAGIPYRIFGGLRFYERKEIKDIVAYLRFISNPADAVSFRRVVNVPKRGIG
DATVQKLLEHADSEGWTVGEALARVGEVPGLSRAVKALSAFGQMIEELRREAPSLLVTQI
VEAILNRTGYVRELEAEKTEEAKGRIENIKEFLSVTKEFDRTADDKTLEEFLAGVSLVSD
TDNYNEDEDAVVLMTMHSAKGLEFPVVFVAGMEEGVFPHSRVQFEETQVEEERRLCYVAI
TRARERLYLARAWRRTLFGNTVSNKPSRFLEEIPASLLVEEDDRAKRDSLFSDATLSSSA
AAAASANKAVGASGFGDAVEFTVGDKVQHGKFGLGIVVKASGSGENQELSVAFPQQGIKK
LLLKYAGLKRV
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
ttgtcgaccgattttttacactccctgaatccggttcaacgcgaggccgtcctgcaccaa
gaggggcctcttttgcttcttgccggggctggttccgggaagacccgcgtcttgactcac
cgcatcggccatctgatcgaacaatgccgggtgagtccctttcatatactagccatcacc
tttaccaacaaggcggccgcagagatgcgggaacggttgggccgcctcatcggaccacgc
gcccacgatgtctgggtgtccacctttcactccacctgcatgcgcatcctgcgcaaagac
ggggaaaagctcggctatgaccggagcttcgtcatctatgactatgatgatcagcagcgc
ctgctcaaggagtgcttgaaagagctcaacatcgacgagaagcgcttcaagcctcaggct
gtcggcgccgccatcagttcggccaagaacaggctcgtgggtcccgtcgcctttgaaagg
caggcctatgatcattttgcgcaaatatctgccaaagtgtaccatatttaccaaaagaaa
ttaaaagcccacaacgctatggattttgacgatctgctcgtcaacggtgtctgcctgttt
cgggagtttccccatgtccttgacaactaccaggaccgcttccggtacatccatgtggac
gagtatcaggacacgaaccatgcccagtatgtgctggtgaaactgctcgccgataagtac
cgcaacctctgtgttgtcggtgacgacgaccagagcatctacggttggcggggcgctgat
atccagaatatccttgactttgagcgcgattaccctgaggctgtcgtgctcaagttggag
caaaactaccgctccaccggcaagatcctcgaagcggccaacgccgtcgtcggcaacaac
agggggcgcaaatcgaaaaagctctggacccagaacccgtcaggccagcccatcgtcgcc
tatcaaggcgaaacagagcacgacgaggcgcgctatatcgtccggaccatcaagcggctt
tctgagtcggaaaaccgcccctatcgcgacttcgccatcttgtaccgaaccaacgcccag
tcgcgggtgttggaagaacatttcatgtacgccggcatcccctatcgcatctttggcggc
ctgcgcttctatgagcgcaaggagatcaaggacattgtcgcttatctacgctttatctcc
aaccctgccgatgcggtcagcttccggcgcgtcgtcaacgtgcctaagcgaggcatcggc
gatgcgacagtgcaaaagctgctcgaacatgctgacagtgagggctggactgtcggcgag
gccctggcgcgggtcggcgaagtgccggggctgtcccgggccgtcaaggcgttgtctgcc
tttggccaaatgatcgaggaactgcgccgggaagcgccgtcgctgctcgtcacccagatc
gtcgaagctatcttgaatcgcacaggctatgtgcgtgagttggaggccgaaaagacggaa
gaggcgaaaggccgcatcgagaacatcaaggaattcctctctgtcaccaaggagtttgac
cggacagccgatgacaagacgctcgaagagttcctggccggcgtctccctcgtatcagat
acggacaattataatgaagacgaagacgccgtcgtcttgatgacaatgcactccgctaag
ggcttagagtttcctgtcgtctttgtggccggcatggaggagggcgtttttcctcacagc
cgcgtccagtttgaagagacccaggtcgaggaggagcgccgcctctgctatgtggccatc
acgcgggcgcgggagcgcctttacctggcccgcgcatggaggcgaacccttttcggcaat
actgtttctaacaagccctcccggtttttggaagaaatcccggcttccctgctcgtcgag
gaggatgatcgggcaaagcgggattcactgttctccgatgccaccctgagcagctctgct
gcggccgcggccagcgcaaacaaggcggtcggcgcttccggctttggcgacgccgtcgag
ttcacagtcggcgacaaggttcagcatggcaagttcggcctgggaatcgtcgtcaaggcc
tccggcagcggggaaaaccaggagctctccgtcgctttcccccagcaggggatcaagaag
ctcctgctcaaatatgccggtttaaaacgggtgtaa
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