Entry |
|
Name |
(GenBank) Ku domain protein
|
KO |
K10979 | DNA end-binding protein Ku |
|
Organism |
hmo Heliomicrobium modesticaldum
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:hmo00001]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
HM1_3135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:hmo03400]
HM1_3135
DNA repair and recombination proteins [BR:hmo03400]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
HM1_3135
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
complement(2335847..2336845)
|
AA seq |
332 aa
MLSLCAHPVKNRMCPGGTTINLDTSFSTKRGKLAFRTGFKLYAARATQGLAESTRGMIVR
SIWKGAISFGLVHIPIKLFAATEEKDVRFHLLHKECHNPIQYQKRCPYCDREVTPEEIVK
GFEYDKGRYVIITQEELEGLAPEGSRSIDIQSFVALKEIDPIFFVKTYYLSPDQHGQKAY
ALLRNALRETDRLALARVILRTKEALVALRVYGKGLAMHTMLYPEEIRSMEPLGDLGESI
EVSAKEQTMAVQLIESLTEPFDPVKWQSEQRERIRHFINAKVQGQAIVEAPQTPTVGKVI
DLMEALKASIQQVKTQQKKEAAPKKERRRKTS |
NT seq |
999 nt +upstreamnt +downstreamnt
atgctcagcctatgcgctcaccctgtcaaaaaccgaatgtgccctggcgggacaacgatt
aatttggatacttctttttcaacgaaacgggggaaactagcctttagaacaggctttaaa
ctttatgcagcgagggccactcaaggccttgctgaatcgacaagggggatgattgtgaga
agcatctggaaaggcgcgatcagctttggtctggtgcacatcccgatcaagcttttcgca
gctactgaagaaaaggacgtgcgctttcacctcctccataaagagtgccacaaccccatc
cagtatcaaaaacgctgtccctattgtgaccgcgaggtgacacccgaagagatcgtcaag
ggctttgaatacgacaagggccgctatgtcatcatcacccaagaagaactagaaggactt
gctcctgaaggcagccgatccatcgatatccagtcctttgtcgccttgaaagagatcgat
ccgattttcttcgtgaaaacctattacctttcaccggatcagcatggacagaaagcctat
gccttgttgcgcaatgccctcagggagactgaccgcctagcccttgcgcgggtgatccta
cgcaccaaggaagctcttgtggccctgcgcgtctacggcaagggactggccatgcatacc
atgctctatccggaggagatccggtccatggaacccttaggcgatctgggcgagagcatt
gaggtatcggcaaaggaacagacaatggcggtccaactgatcgagagcctcacagagcct
tttgaccccgtcaaatggcagagcgaacagcgcgaacgaattcgccattttatcaacgcc
aaggtccaaggccaggccattgtagaagcgccccagacgccgacagtcggcaaagtgatc
gatttgatggaggcgctcaaggcgagcattcaacaggtgaaaacccagcaaaagaaagaa
gcagcgcccaaaaaagagcgccgccgtaaaacctcatga |