KEGG   Halobaculum magnesiiphilum: K6T50_01965
Entry
K6T50_01965       CDS       T07527                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
hmp  Halobaculum magnesiiphilum
Pathway
hmp03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hmp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    K6T50_01965
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hmp03019]
    K6T50_01965
Messenger RNA biogenesis [BR:hmp03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     K6T50_01965
SSDB
Motif
Pfam: RNase_J_b_CASP Lactamase_B_2 Lactamase_B RMMBL
Other DBs
NCBI-ProteinID: QZP37960
UniProt: A0A8T8WDP0
LinkDB
Position
complement(361494..362846)
AA seq 450 aa
MEVEIATIGGYEEVGRQMTAVRAGDDIVVFDMGLNLSQVLIHDNVETEKMHSLDLIDMGA
IPDDRIMSDMEGDVQAIVPTHGHLDHIGAISKLAHRYDAPVVAAPFTIELVKQQVKGENK
FNVDNDLVKMEAGETMSIGDSGNVEMEFVHVTHSIIDAVNPVLHTPEGAVVYGLDKRMDH
SPVLEDPIDMERFREIGREGNGVLCYIEDCTNAGRKGRTPSESHARNHLKDTLMSIEDYD
GGIVATTFSSHVSRVSSLVEFAQEIGREPVLLGRSMEKYSGTAERLDFVDFPDDLGMYGH
RKSVDRTFKRIMQEGKEKYLPIVTGHQGEPRAMLTRMGRGETPYELDDGDKVVFSARVIP
EPTNEGQRYQSERLLKMQGARIYDDIHVSGHLREEGHYQMLDALEPQHVIPAHQDMKGFS
PYVDLAGKKGYKLGRDLHVTQNGNMIQLTE
NT seq 1353 nt   +upstreamnt  +downstreamnt
atggaagtcgaaatcgcaacaatcggcggctacgaggaagtcggccgccagatgacggca
gttcgcgcaggggacgacatcgtcgtgttcgacatgggcctcaacctgagtcaggtcctg
atccacgacaacgtcgagacagagaagatgcacagcctggacctcatcgacatgggggcc
atcccggacgaccggatcatgagcgacatggagggcgacgtgcaggccatcgtgccgacg
cacggccacctcgaccacatcggcgccatctcgaagctggcgcaccgctacgacgcgccc
gtcgtcgcggcgccgttcaccatcgagctggtcaaacagcaggtgaaaggcgagaacaag
ttcaacgtcgacaacgacctcgtcaagatggaggccggcgagacgatgtccatcggcgac
tccggaaacgtcgagatggagttcgtccacgtcacgcactccatcatcgacgcggtcaac
ccggtcctccacacccccgagggcgcggtcgtctacgggctcgacaagcgcatggaccac
tcgccggtcctcgaggaccccatcgacatggagcgcttccgcgagatcggccgcgagggc
aacggcgtcctctgttacatcgaggactgcacgaacgctggccgaaagggacgcaccccc
tcggagtcgcacgcgcgcaaccacctcaaggacacgctgatgagcatcgaggactacgac
ggcggcatcgtcgccacgacgttctcctcgcacgtctcgcgcgtctcctcgctcgtcgag
ttcgcacaggagatcgggcgcgagccggtgctcctggggcgctcgatggagaagtactcc
ggcacggcggagcgcctggacttcgtcgacttcccggacgacctcgggatgtacggccac
cggaagtccgtcgaccggacgttcaagcggatcatgcaggagggcaaggagaagtacctc
cccatcgtcacgggtcaccagggcgagccgcgcgcgatgctcacccgcatgggccgcggc
gagaccccgtacgaactggacgacggcgacaaggtcgtcttctcggcacgggtcatcccg
gagccgacgaacgaggggcagcgctaccagtccgagcgcctcctgaagatgcagggcgcg
cgcatctacgacgacatccacgtgtcgggccacctccgcgaggaggggcactaccagatg
ctcgacgcgctggagccccagcacgtcatcccggcccaccaggacatgaagggcttctcg
ccgtacgtcgacctcgcgggcaagaaggggtacaagctgggtcgtgacctccacgtcacg
cagaacgggaacatgatccagctgaccgagtaa

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