Halobaculum magnesiiphilum: K6T50_01965
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Entry
K6T50_01965 CDS
T07527
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
hmp
Halobaculum magnesiiphilum
Pathway
hmp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hmp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K6T50_01965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hmp03019
]
K6T50_01965
Messenger RNA biogenesis [BR:
hmp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
K6T50_01965
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
Lactamase_B_2
Lactamase_B
RMMBL
Motif
Other DBs
NCBI-ProteinID:
QZP37960
UniProt:
A0A8T8WDP0
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All DBs
Position
complement(361494..362846)
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AA seq
450 aa
AA seq
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MEVEIATIGGYEEVGRQMTAVRAGDDIVVFDMGLNLSQVLIHDNVETEKMHSLDLIDMGA
IPDDRIMSDMEGDVQAIVPTHGHLDHIGAISKLAHRYDAPVVAAPFTIELVKQQVKGENK
FNVDNDLVKMEAGETMSIGDSGNVEMEFVHVTHSIIDAVNPVLHTPEGAVVYGLDKRMDH
SPVLEDPIDMERFREIGREGNGVLCYIEDCTNAGRKGRTPSESHARNHLKDTLMSIEDYD
GGIVATTFSSHVSRVSSLVEFAQEIGREPVLLGRSMEKYSGTAERLDFVDFPDDLGMYGH
RKSVDRTFKRIMQEGKEKYLPIVTGHQGEPRAMLTRMGRGETPYELDDGDKVVFSARVIP
EPTNEGQRYQSERLLKMQGARIYDDIHVSGHLREEGHYQMLDALEPQHVIPAHQDMKGFS
PYVDLAGKKGYKLGRDLHVTQNGNMIQLTE
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggaagtcgaaatcgcaacaatcggcggctacgaggaagtcggccgccagatgacggca
gttcgcgcaggggacgacatcgtcgtgttcgacatgggcctcaacctgagtcaggtcctg
atccacgacaacgtcgagacagagaagatgcacagcctggacctcatcgacatgggggcc
atcccggacgaccggatcatgagcgacatggagggcgacgtgcaggccatcgtgccgacg
cacggccacctcgaccacatcggcgccatctcgaagctggcgcaccgctacgacgcgccc
gtcgtcgcggcgccgttcaccatcgagctggtcaaacagcaggtgaaaggcgagaacaag
ttcaacgtcgacaacgacctcgtcaagatggaggccggcgagacgatgtccatcggcgac
tccggaaacgtcgagatggagttcgtccacgtcacgcactccatcatcgacgcggtcaac
ccggtcctccacacccccgagggcgcggtcgtctacgggctcgacaagcgcatggaccac
tcgccggtcctcgaggaccccatcgacatggagcgcttccgcgagatcggccgcgagggc
aacggcgtcctctgttacatcgaggactgcacgaacgctggccgaaagggacgcaccccc
tcggagtcgcacgcgcgcaaccacctcaaggacacgctgatgagcatcgaggactacgac
ggcggcatcgtcgccacgacgttctcctcgcacgtctcgcgcgtctcctcgctcgtcgag
ttcgcacaggagatcgggcgcgagccggtgctcctggggcgctcgatggagaagtactcc
ggcacggcggagcgcctggacttcgtcgacttcccggacgacctcgggatgtacggccac
cggaagtccgtcgaccggacgttcaagcggatcatgcaggagggcaaggagaagtacctc
cccatcgtcacgggtcaccagggcgagccgcgcgcgatgctcacccgcatgggccgcggc
gagaccccgtacgaactggacgacggcgacaaggtcgtcttctcggcacgggtcatcccg
gagccgacgaacgaggggcagcgctaccagtccgagcgcctcctgaagatgcagggcgcg
cgcatctacgacgacatccacgtgtcgggccacctccgcgaggaggggcactaccagatg
ctcgacgcgctggagccccagcacgtcatcccggcccaccaggacatgaagggcttctcg
ccgtacgtcgacctcgcgggcaagaaggggtacaagctgggtcgtgacctccacgtcacg
cagaacgggaacatgatccagctgaccgagtaa
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