Halobaculum magnesiiphilum: K6T50_05140
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Entry
K6T50_05140 CDS
T07527
Name
(GenBank) transcription factor
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
hmp
Halobaculum magnesiiphilum
Pathway
hmp03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hmp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
K6T50_05140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hmp03021
]
K6T50_05140
Transcription machinery [BR:
hmp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
K6T50_05140
Prokaryotic type
Archaeal type
TFE
K6T50_05140
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
DNA_ligase_ZBD
Sigma70_r3
Rad50_zn_hook
Zn_ribbon_3
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-ProteinID:
QZP38528
UniProt:
A0A8T8WF99
LinkDB
All DBs
Position
complement(1023737..1024276)
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AA seq
179 aa
AA seq
DB search
MAFEDLLEDPVIQKYLHELVGPTGMPVAAAPPDGEVTDEELAEEMGLELNDVRRALFILY
ENDLASYRRVRDEDSGWLTYLWTFHYENIPENLEEEMHRLLEGLEERRSYESDHQFYLCE
VDSIRFEFEEAMEFGFECPECGSPLESMENSRLVEAMEWRIDQLADELNVDREEAGAQA
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atggcttttgaggacctcctggaagaccctgttatccagaagtacctccacgagctcgtc
ggcccgacggggatgcccgtcgcggcggccccgccggacggcgaggtcaccgacgaggag
ctcgccgaggagatgggactggagttgaacgacgtgcgccgcgcgctgttcatcctctac
gagaacgacctggcgtcgtaccgccgcgttcgcgacgaggactcggggtggctcacctac
ctgtggacgttccactacgagaacatcccggagaacctcgaggaggagatgcaccgcctg
ctcgagggactggaggagcgccgatcctacgagtcggaccaccagttttacctctgtgag
gtcgactcgatccgcttcgagttcgaggaggcgatggagttcggcttcgagtgtcccgag
tgcgggtcgccgctggagtcgatggagaacagccgcctcgtcgaggcgatggagtggcgc
atcgaccagctcgccgacgagctcaacgtcgaccgcgaggaagccggggcgcaagcgtag
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integrated database retrieval system