Halobaculum magnesiiphilum: K6T50_10085
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Entry
K6T50_10085 CDS
T07527
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
hmp
Halobaculum magnesiiphilum
Pathway
hmp03022
Basal transcription factors
hmp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hmp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
K6T50_10085
09124 Replication and repair
03420 Nucleotide excision repair
K6T50_10085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hmp03021
]
K6T50_10085
03036 Chromosome and associated proteins [BR:
hmp03036
]
K6T50_10085
03400 DNA repair and recombination proteins [BR:
hmp03400
]
K6T50_10085
Enzymes [BR:
hmp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
K6T50_10085
Transcription machinery [BR:
hmp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
K6T50_10085
Chromosome and associated proteins [BR:
hmp03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
K6T50_10085
DNA repair and recombination proteins [BR:
hmp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
K6T50_10085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
Zot
SLFN-g3_helicase
ATPase
DUF7539
AAA_25
AAA_34
AAA_30
GvpD_P-loop
nSTAND3
FliJ
HBB
PhoH
PIF1
AAA_11
BAR
HrpJ
Motif
Other DBs
NCBI-ProteinID:
QZP36661
UniProt:
A0A8T8WA08
LinkDB
All DBs
Position
1994064..1996265
Genome browser
AA seq
733 aa
AA seq
DB search
MSTTDGHLRFFPYDEPYPNQEEAMDRIANSLERGQDVLFEGAPGTGKTLSALVPALEHAR
EHDRTVVITTNVHQQMRQFVEDARAIHETERIRATVFKGKSSMCHIDVDYQECQTLRDTT
RSLVEDRSDKEQLEQRLDDLTDEMREGADSAGGGSGGDPGSAAEARQAVQEELDRLDEEI
DDEAANTCDYYLQNLTGDTGEFFSWLFDDVRTPDEVYEYAGSRGFCGYELLKEGMEDVEL
VVCNYHHLLDPQIREQFFRWLDRDPQDVITVFDEAHNVEDAARDHASKTLTENTLESALN
ELEETDDSRAEPAENVLRAFTEALRDTYDDKLGFGAREQIGENWDDVSIANDDRRDDLTL
AFLDRYEGQGIRAECDLALQLGKRLDEEYEEAYRDGETTTRRECQTLQAAAFVSAWMDDG
GELGQHPVVSVRRDAGTDEVYGRAELYTCIPREVTAELFDEVYASVLMSATLRPFDVTED
VLGLSDPATLAYGMEYPEENRRTFSVATPALFASERDDPATQETIAATLSDVVRFTPGNS
LLFFPSYAEAERYHELLSGDPNLGTLLLDGSEPDTEQLRRRLVDSGDATLFTSLWGTLAE
GVSFDGDDARTVAVVGVPYPHLSERMEAVQEAYDRAFAERSRDAGWEYAVEIPTVRKTRQ
ALGRVIRSPEDFAVRALLDKRYTSADMGKYSVRGAFPVEEREELIDIGPGKLKFAMLNFF
TDHAAYDGEPPEP
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgacgacggacggtcacctgcgcttcttcccgtacgacgagccgtacccgaaccag
gaggaggcgatggaccggatcgccaactcgctggagcgcgggcaggacgtgctgttcgag
ggcgcgccggggaccggcaagacgctctcggcgctggtgcccgcgctggagcacgcccgc
gagcacgaccgcaccgtcgtcatcacgacgaacgtccaccagcagatgcgccagttcgtc
gaggacgcccgcgccatccacgagaccgagcgtatccgcgcgaccgtgttcaaggggaag
tcgtcgatgtgccacatcgacgtggactaccaggagtgtcagacgctgcgcgacaccacg
cgctcgctcgtcgaggaccggtccgacaaggagcagctggaacaacggctcgatgacctc
accgacgagatgcgcgagggcgccgacagtgcgggcggcggctccggcggcgaccccggg
agcgccgccgaagccagacaggccgtacaggaggagctggatcgtctcgacgaggagatc
gacgacgaggccgccaacacctgcgactactacctccagaacctcaccggcgacaccggc
gagttcttctcgtggctgttcgacgacgtgcgcacccccgacgaggtgtacgagtacgcc
ggcagccggggcttctgcggctacgagctgctgaaggaggggatggaggatgtcgaactc
gtcgtctgcaactaccaccacctgctcgacccgcagatacgcgagcagttcttccggtgg
ctcgatcgcgacccgcaggacgtgatcaccgtcttcgacgaggcgcacaacgtcgaggac
gccgcccgcgaccacgcctcgaagacgctcaccgagaacaccctggagtcggcgctcaac
gagctggaggagaccgacgactcccgcgccgaacccgccgagaacgtcctccgggcgttc
accgaggcgctgcgggacacatacgacgacaagctcggcttcggcgcccgcgagcagatc
ggcgagaactgggacgacgtgagcatcgccaacgacgaccgccgcgacgacctgacgctc
gcgttcctcgaccgctacgagggacaggggatccgcgcggagtgcgacctcgcgctccag
ctcggcaagcgcctcgacgaggagtacgaggaggcgtaccgcgacggcgagacgacgacc
cggcgggagtgtcagaccctgcaagcggccgcgttcgtctcggcgtggatggacgacggc
ggcgagctcggccagcacccggtcgtctccgtccggcgcgacgccggtaccgacgaggtg
tacggccgcgcggagctgtacacctgcatcccgcgggaggtgaccgcggagctgttcgac
gaggtgtacgcgagcgtcctcatgtccgccaccctccgcccgttcgacgtgacagaggac
gtgctcgggctgtcggacccggcgacgctcgcgtacgggatggagtaccccgaggagaac
cgccgaaccttctcggtcgccacgccggcgctgttcgcctccgagcgcgacgaccccgcg
acacaggagacgatcgccgcgacgctgtcggatgtcgtgcggttcacgcccggcaacagc
ctcctgtttttcccgtcctacgcggaggccgagcgctaccacgaactgctctcgggcgac
ccgaacctgggtaccctcctgctcgacggttccgagcccgacacggagcaactccgtcgc
cgcctcgtcgacagcggtgacgcgacgctgttcacgtcgctgtggggcaccctcgccgag
ggcgtgagcttcgacggcgacgacgcccggacggtcgcggtcgtgggcgtgccgtacccg
cacctctccgagcgaatggaggcggtacaggaggcctacgaccgcgcgttcgccgagcgc
tcgcgggacgccggctgggagtacgccgtcgagatcccgaccgtccgcaagacccggcag
gcgctcggccgcgtgatccgctcgcccgaggacttcgccgttcgcgcgctgctggacaag
cgctacacctccgcggacatgggcaagtactccgtgcggggcgcgttccccgtggaggag
cgcgaggagctgatcgacatcggccccgggaaactgaagttcgcgatgttgaacttcttc
accgaccacgcggcctacgacggggagccgccggagccgtag
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