Helicobacter mustelae: HMU00370
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Entry
HMU00370 CDS
T01191
Name
(GenBank) Putative metallo-beta-lactamase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
hms
Helicobacter mustelae
Pathway
hms03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hms00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HMU00370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hms03019
]
HMU00370
Messenger RNA biogenesis [BR:
hms03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HMU00370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_6
Motif
Other DBs
NCBI-ProteinID:
CBG39301
UniProt:
D3UFN0
LinkDB
All DBs
Position
complement(39424..41445)
Genome browser
AA seq
673 aa
AA seq
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MENNHNNENTPNPETKKRKFFKPRFKKDQGGATESGEKKEGHPHTAHTKEENKEPNKRRF
SFKNKNAQEKDTPAINGTRDIQNVNERGNLGFHKDLKKGVEANNRIQKSSLNPHYKLNLN
TKAKVRITPLGGLGEIGGNMMVMETENSAIIIDVGMSFPEENMHGVDILIPDFSYIHAIK
DKIAGVVITHAHEDHIGAVPYLYKQLQFPLYGTPLALGMIGNKFDEHGLKKFRSFFKIVE
KRHPIPIGDFEIEWIHITHSIIDASALAIKTEAGVIIHTGDFKIDHTPIDDLPTDLHRLA
HYGEQGVMLLLSDSTNSHKTGSTASEASVGPTFDALFKSAEGRVIMSTFSSNIHRVYQAI
TYGIKYNRKIAVIGRSMEKNLDIARELGYIDLPSKIFIEAHEVNNYPDEEILIVTTGSQG
ETMSALYRMATDEHRHIKIKPTDMVIISAKAIPGNESSVSTVLNFLIKARARVAYQDFSE
IHVSGHAAQEEQKLMLRLIKPKFFLPIHGEYNHVARHKETAMKCGVLEKNIYLMEDGDQI
EVNPSYIRKVKTIKSGKVFIDNQTCTEIDNIVVNERQVLADCGILIVVACINKTEQKLLK
DTQITTLGILNPKEEKAYAKELETLLGMHLKNLKPEVIGNAKLLENDLRNMLRKVLFKKT
KKYPTIIIHTFLR
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atggaaaataatcacaacaatgaaaacactccaaatccagaaacaaaaaaaagaaagttt
tttaaaccccgattcaaaaaagaccagggaggtgcgacagagtctggtgaaaaaaaagaa
ggacacccccacacagcgcatacaaaagaagaaaacaaagagccaaacaaaagaagattt
agcttcaaaaacaaaaatgcacaagaaaaagatactcctgcaatcaatggcacaagagat
atccaaaatgttaatgaaagagggaatctgggtttccacaaagatctcaaaaaaggagtg
gaggcaaataacaggattcaaaaaagcagcctaaatcctcactacaagctcaacctcaac
accaaagcaaaggtgcgcatcacgccacttggcggattgggagagatcgggggcaacatg
atggtgatggaaacagaaaactctgccatcatcattgatgtagggatgagtttccctgag
gagaatatgcatggggtggatattttgatcccagattttagctacatccatgcaatcaaa
gacaaaattgctggggtagtgatcacgcatgcgcatgaagatcatattggcgcggtcccc
tacctttataagcagctgcaatttcccctctatggcactccattagcactggggatgatt
ggcaataaatttgatgaacatggactcaaaaaattccgctctttttttaaaattgtagaa
aaaagacatcccattcccattggagattttgagatcgaatggatccacatcacgcactcc
atcattgatgcctccgcacttgctatcaagacagaggctggagtcatcatccataccggg
gatttcaaaatcgatcacactcccattgatgatctaccaaccgatttgcatcgccttgct
cattatggagagcagggggtcatgcttttactaagcgactccaccaattctcacaaaacc
ggtagcaccgcatctgaggcgagtgtggggccgacatttgatgcgctttttaaatccgca
gagggaagggtcattatgagcaccttttcctctaacatccaccgcgtatatcaggccatc
acctatggaatcaaatataatagaaaaatcgctgtcatcggcagatctatggaaaaaaat
ctcgatatcgcaagagagctaggctatatcgatctacccagcaagattttcatcgaagca
catgaagtgaataattatcctgatgaagagattttgatcgtgaccacagggtctcagggc
gagacaatgagtgcactctatcgcatggcaacagatgaacatcgccatatcaaaatcaag
cccacagacatggtaatcatttctgcaaaggccatccccggcaatgagagctctgtctct
actgtattgaatttcctaatcaaagcaagggcaagggtggcctatcaagatttcagcgaa
atccatgtgagcgggcatgcggcacaagaggagcaaaagctcatgctgcgactcattaaa
cccaaatttttcctgcccatccatggagaatacaatcatgtcgctagacacaaagaaacc
gcgatgaagtgcggagtgctagaaaaaaatatctatctcatggaagatggcgatcaaatc
gaggtaaatcccagctatatccgtaaggtaaaaaccatcaaaagcggcaaggtcttcatc
gacaatcagacttgcacagaaattgataacatcgtcgtgaatgaacgccaagttcttgca
gactgcggaatcttgatcgtggtagcatgtatcaacaaaacagaacaaaaacttctcaaa
gacacccaaatcactacgcttggcatcctcaatcccaaagaggaaaaggcctatgcaaaa
gagctagaaacattgctggggatgcatctcaagaatctcaaacccgaagtaataggcaat
gccaaattgctggaaaatgatctgcgcaatatgttaagaaaagtgcttttcaaaaaaacc
aagaaatatcccaccatcataatccatacttttctgaggtga
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