Helicobacter mustelae: HMU00630
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Entry
HMU00630 CDS
T01191
Name
(GenBank) putative autotransporter protein
Organism
hms
Helicobacter mustelae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autotransporter
Motif
Other DBs
NCBI-ProteinID:
CBG39327
UniProt:
D3UFQ6
LinkDB
All DBs
Position
78331..82644
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AA seq
1437 aa
AA seq
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MITKKSNLEKNKKGGIGIIKKALKHRGSPSFFIASTLAFTLSSNHLFATSRWVTPASDTA
FWNNCLSTSACPSTNQGKNVMFIFMNVSGANGVGVYNTEKLLLFQIRPPVYSLSFSDANF
ERRHFDLGDKSMIFDFGSQDISSERKFTVTAGYKFVGNIEIDNTGNNPAETNATAQNITT
KGVFDGRFTSGMEGNILIQNQGTNTFALAMNMNSAAKPGSIILGQNNSAFTTFRFNPADI
FPRSPGVVESQVVIYANLYRYQTNNESSGLGIATVNFSGDGVFQGNIGGVHDNINPNAKA
YNVYFSNGAVMKGNIITGTPSSGKDYVQKIVSFGSGNVTRQAVITSVSPYTTNASTVWLE
GNIISYGIGGTTTAGNFSQKQGGNIVAFQTGTMKGNIEARHLSNASPGYNQVQFLQDGVV
YEGNITASGGENVLFFGRKESKTVGSSSSGGITPAASGNGTADNGKLQTIFTGNGDTFKG
NLLAENGGKNTMTFYKNGKIEGSTGIVQITANNASNTIELRNGGSITNARILSQEGGKNS
IGFSTSDGGASSASQTGGSTGTGSTTPNSKFDAISSGNNSSTTILLQTPMTLDANITYGG
HFAGNSYVYDGSNNTVTLFFANKRSEGTTAPSTTPSNNASQTRAASQASNTSPVNSTSST
TELAASFKDGISLQLQDKSINLDGKDGTYSTSFISTAMSHGLGANSTTPLHVRVIKSGDA
NNVNNSITLSGIAVGSVSALSSSDATNPAAINSTYTINLQNKSIFLGSFSKDLQNSHTKV
NLVLEHNAKFIADSSTQLENLTIQAATFDKNDSATPTLLQNNTVVDVASGGGSNNITREG
NTFYLLSIGKDPTNIAQATGGASNTSQTGGSTTPNNALGANGLSGSNALFKVYVNTNANQ
GSNGSNNGSGAALNNQHSSNGSGLYGYIYSDRVIVHNVKNSASGNTITRSTGGSTSTATS
ITPLTEYLQILASGNVSSIKYHGGGTETKGNIGVATVRNDASGKALVDFKTIGTIVGFDA
LDTKLIAIKTDAYGKVKNNGLIGASGAGASGGTSGGGIHGNDYTTYFLQSGVSGTSRANQ
LASATALASNYYLYLANINSLNKRLGELRNNPHANGVWIRLFNGMQTTTFALQTKSIYTT
LQGGYDYAFGSEGANDYLGFAISYANAGMDSLMRAQAFNHAQKGIKSSSGNAFEIALYNS
YVQDGATRGTNFKNGLYSDSIIKLSFLANKIKLAGNNNTPSVNNFGFTFSQEIGYRFLLG
ENQEWYITPQGELTLGYLNQSNLKQVLGSHYLSGVQTSIFTLQGRIGSSFGYRFYQFTAD
KNYYPEIYLGLYGVGNYIGGGDITLISNLGSVNALRTLGSTGRFLFNLGTNFTIKDNHRV
YFDFERSFGGRIIVDYQFNIGYRYSFGENKKYASLAGSISQTIKRDEKKQNKEEITE
NT seq
4314 nt
NT seq
+upstream
nt +downstream
nt
atgattacgaaaaaatctaacttagaaaaaaacaaaaaaggagggataggaatcatcaaa
aaagctctaaagcatcgtggttccccctcttttttcattgccagcactcttgcttttacg
cttagctcaaatcatctttttgcaacttcaagatgggtgacaccagcaagcgacaccgcc
ttctggaataattgtctttccacatccgcttgtccttctacgaatcagggtaaaaatgtt
atgtttatttttatgaatgtgagcggtgctaatggtgttggagtttataacacagaaaaa
ttgttacttttccaaatccgtccacctgtgtatagccttagctttagtgatgcaaatttt
gaacgcaggcattttgatcttggagataaaagcatgatctttgattttggctcccaggac
atttcttctgagaggaagtttactgtcactgcaggttataaatttgtcggcaatatcgaa
attgacaatacaggaaataaccccgcagaaaccaatgcaacagcacaaaacatcacaaca
aaaggagtttttgacggaagatttacttcaggaatggagggaaatattctcatccaaaac
caaggaaccaatacctttgctcttgctatgaatatgaattctgcagctaaacctgggagc
attatcttggggcaaaataatagtgcttttactacatttcgattcaatccagcagacatt
ttcccccgcagtcctggtgttgtagagagtcaagtagtaatctatgccaatctctatcgt
tatcagacaaataacgaatccagtggcctaggtatcgctacggtcaattttagtggagat
ggggtattccaggggaatatcggtggcgtgcatgataacatcaatcctaatgccaaggcc
tacaatgtctatttctccaatggagcggtaatgaaggggaatatcataacaggaacccct
agttctggcaaggactatgtacaaaaaatcgtatcctttggcagcggcaatgtcacaaga
caagcggttatcacatctgtctctccctatactactaatgcaagcacggtttggctagag
ggaaatatcatctcttatgggattggaggaaccactactgcagggaacttctctcaaaaa
caagggggaaatatcgttgccttccaaacaggaaccatgaagggaaatattgaagcaagg
catcttagcaatgcaagccctggatacaatcaagtacaattcttgcaagatggagtggtg
tatgaggggaatatcactgcaagtggtggagagaatgtgttattttttggtagaaaggaa
tccaaaacagttggatctagcagcagtggtggcatcactcctgctgcctctggcaatggc
actgcagacaatggcaaattacaaaccattttcactggcaatggagataccttcaaagga
aatctcctagcagaaaatggtggaaaaaacactatgacattttataaaaatggcaagatt
gaaggcagcacaggcattgtgcaaatcacagctaataatgctagcaatactattgaacta
agaaatggcggaagcatcacaaatgctaggatcctctcacaagaaggaggcaaaaactcc
attggtttttccacttctgatggaggagcaagcagtgcaagccaaacaggtggttccaca
ggcacaggttccacaacccccaactcaaagtttgatgcaatctcttctggcaataatagt
tctaccaccatcctcctccaaactcccatgaccctagatgctaacatcacttatggaggg
cattttgctgggaattcctatgtttatgatggcagcaataatactgtaactctattcttt
gccaataagagaagtgagggcactacagctcctagcacaactccctctaacaatgcaagt
caaaccagggcagcttcacaagcaagcaatacaagcccagtaaatagcacaagttctact
acagagctggctgcaagcttcaaagatggcatctctttgcaactccaagataaaagcata
aatttagatggcaaggatggcacttattctacctcttttatctccactgctatgagtcat
ggactaggagctaatagcacaactcctctccatgtccgtgtaataaaaagtggtgatgca
aataatgtcaacaactccatcacattaagtggtattgcagtgggctctgtgagtgcactt
tcctcttctgatgcgacaaatcctgcagcaataaattctacctatacaattaacctgcaa
aataaaagcatcttcctaggaagctttagcaaggatttgcaaaatagccacaccaaggta
aatttggtattagaacacaatgcaaaattcattgcagattccagcacacagctagaaaac
ctaaccatccaagcagccacctttgataaaaatgatagtgcaacacccactcttttgcaa
aacaataccgtagtagatgttgctagtgggggtggcagcaataatattacaagagaggga
aataccttctatctcctaagcattggaaaggatcccacaaatatagcacaagcaactgga
ggtgcaagcaatacaagtcaaacaggtggttccacaaccccaaataatgcactaggagcc
aatggtcttagcggaagtaatgcgctctttaaggtctatgtaaataccaatgccaatcaa
ggaagcaatggtagcaataatggcagtggagcagcattgaataatcaacactcctctaat
ggcagcggcctttatggatatatttattctgatagggtgattgttcataatgtcaaaaac
agtgcttctggaaatacaatcactagaagcactgggggaagtacaagcactgcaactagc
atcacacctctcacagaatacctccaaatcctagcaagtggcaatgtatcaagcattaaa
tatcatggtggtggtacagaaactaagggaaatattggagtggcaacagtgagaaatgat
gcctctggcaaagcattagtagattttaaaaccataggaacaattgtgggatttgatgcg
cttgataccaagctcattgctataaaaacagatgcctatggcaaggtaaagaacaatgga
cttattggagctagtggagctggagctagtggaggcactagtgggggtggaattcatgga
aatgactacaccacttatttcttgcaatctggggtttctggtacttctagggcaaaccaa
cttgcatcagccactgcactagctagtaattactatctctacctagccaatatcaatagc
ctaaataagcgcctaggagaacttagaaataatccccatgccaatggtgtgtggatccga
ctatttaatggtatgcaaaccacaacctttgcgctccaaaccaaatccatctacaccact
ctgcagggtggctatgattatgcctttggaagtgagggggctaatgattatctaggcttt
gcaatctcttatgccaatgcgggtatggattctctcatgagggctcaagcattcaatcat
gcacaaaaaggaatcaaatctagcagtggcaatgcctttgaaatcgcactctataactcc
tatgtacaagatggtgcaacaagaggcacgaattttaaaaatggtctttatagtgatagc
atcataaagcttagctttcttgctaataaaatcaagcttgcagggaataacaacactccc
agtgtgaataactttggctttaccttttctcaagagattggctatcgcttcttgctaggg
gaaaatcaagagtggtacattactccacaaggggagctcactctgggatatttaaaccaa
agcaatctcaaacaggtgctaggaagccattatcttagtggtgtgcaaacctccatcttc
acattgcaaggacgcataggaagcagctttggctataggttttatcaattcactgcagat
aaaaactattacccagagatttatttgggattgtatggagtggggaattatattggtggg
ggagatatcaccctcatctccaatctaggttctgtaaatgctttaaggacactaggctct
acgggaagattcctctttaacctagggacaaatttcaccatcaaagacaatcacagagtg
tattttgattttgaaagaagctttggaggcaggattattgtagattatcaattcaacatt
ggctatcgctatagctttggagaaaacaagaaatatgcctctttagcaggtagcattagc
cagactattaagagagatgagaagaaacaaaacaaagaagaaataacagaatga
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