Helicobacter mustelae: HMU01180
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Entry
HMU01180 CDS
T01191
Name
(GenBank) putative autotransporter protein
Organism
hms
Helicobacter mustelae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SO_alpha_A3
Motif
Other DBs
NCBI-ProteinID:
CBG39380
UniProt:
D3UFV9
LinkDB
All DBs
Position
complement(145375..153786)
Genome browser
AA seq
2803 aa
AA seq
DB search
MNKKFHQPSWAEKTWANSSTNKNDCTDIANAPSIGYFKRPLRAFGSSCFIASTLAFTLQT
ALAQASTTTSNAPITIDSDKKEIPETINITTPNQTAIEFKPTSATTNPITAHLKQNTSTV
TVTSSVTTGTNTGIGLASDAQSDVGLIITGKNNTTSSGGGGTATTPSTSDGSILFKGFKA
GDKIINFTGGSLTFDKVSIAVDGQSTTATQPQARSADSSAGASGGTLASGASYGIYNGPA
ASSGGSGSSNGATGLIYNFGTTTFTNIQGKEGGSAIGVWMANNATFSGVLKFANIQGGNG
TASSDGGDAIGIGNPDAASSGSGGTQPLVTAKSAPSPTTSNPKQAVTLTLNNAQASFHLV
GGNGGSGTATEGSATVTAATTASTTTGAQNGNGGNAIGIAGSSASDIIVKFGNGGSVITP
DVAKPDSSQNNSLTFTLTGGNGGKGNGGNAIGIMINQNDRGVVLNGPGKVIFSQLTGGQK
GSGENATAGNTYVIDNQSTRTQSNPPGSNMPTGPVPGSIILEGGAQIIVGTDPSSTGSSG
GSGSDTTTPYAAILVNDTGKTANFNFGEGGATMVTKLHQNSSIEGMELQSGNANVTGNFA
VFGGHVKASQNDNNRENAIGITVGNNTTLTATGSGLNLAVIGGTAVSINAPGGSANGLHL
GASNAIGIALKGGTLGGGVFKLAVAGGNGAKQNTGSNNGGDAIALLNEGNSKIENSNIEI
KLSEGNAGIQVINPVATTEQPVVQEHNSNDGIAWALQNQSGTLTLKNSTLTVGRDSTPSV
RAIIADGGGGDIYNFGTGENKTIASLTLSQPTTQSLASSKDGAQQTEPTNVAAVVINTLS
DAVVFQGNASFSVTNDKTGDAYGIMGSQKEFKPTPPAAPPAPSAPKAPAAVVLASDPAPA
APDAKNSDPASVLVFGISENSTKDNNDASKVANITFANITAGNGNSQTNSKNGGQAVGIV
GSQYGSTALIFENNSTVTFQNIQGGNGGSGGNGGNATGILVGTNNKPVVLSGQGKIIFSQ
LTAGAGGANEANAKAGTAGMTYVIDNQTTQPASPPNPPKAPATQSDGNYGVVIENGAQIV
VGTTPTEQNQGTDSTSPYTGIIVNTNANTVSNFNFGKATTSNFDSGTFISSEAQNVSTIG
MDVKQGKVYAKGVLTVGGTPTGTVDDKTVTGIQLSGGTLTSASPTTESGKQADSLSVYAG
GYAGGKAPAQENGAITVTAPGAMVQGAKMAGQDNSTATSAAAGNGNGAAAVGIAINAGAT
LGGGTFKFHAQGGNGGSGTGNGGNATGIALEGGSIDGSQVDVIAIGGNGAKATSGTNGNG
GDAIAIANSGNSTIKNAIINVNIAAGKEGSQVQDAPKPQVTPPQANDSGTSNSQTSDKSN
SSSTPSAQTKGDQATNSADTSPSSPPSPARSEDSPAPQSQVNSVAQGSSHDTQASGASGE
SGGDSTQGAKQARSTEIVLAANTAEKDPGIDAGVGSDATPPKNAAQDATAGKNGLLYVIK
NTSGTLTLQNSSINVPAINSTQAANNPPKAIITDNLGGDIYDFGKSTVASFVAETDNLAA
IVLGASTNMQGNASFSVHSKSGLVAGIIANSKATPSTPGVNAVSSGNSTSPSTQTSPLTL
TLGASTDTNGKTTPATLTFDIAGGNTASTPSATSAASPYNAYGILVKEHSFNLEGKGDII
FSNVGQNGAIIAVGTTVPGINSTSTTSKDAVLPATTTGATLNIKEGVRIIAGSAPSMPRG
SGRIGTTVIYNNLSGTSYVFGEGNNSTNVLANGTGNSTLTAFGAAQSANISGNLEVRNTD
SSDSPNGTGTFTGISISGGVEDTVLNIVGATKVSVNANPATSTPAPAPQTQPSNQGTTGS
SGSTSTPTPSKPAPQADDTGKDTTKVADAAGKTSESQPQSQSQPTAGSTDQTQGSSTPEV
KSSDQTQPDPTKTIALATVLASTTNSPINVVGIETKGNGGTINLDANLIMDLTGNTATGI
KINGGALKLSAGPASTTGAKTGSTDVRQLIIHATSTKAGSAGPVIVDGSVGTLIVGKNVS
IVGSNNTSAVSFSTTAGNGKDSSGSTGSNNTQASLYGNVANAQFKLGNTILDSNNYGIYA
AQNTNISLAANTTLNITAQQAFGAANNANLNVALVNRSVIEIHGQGGTINTLSSDKDTYG
AVVSLAGNKQERSINTTFRTLTIKNITANHVDFKVMGTTKDLGTGKNNAFASIEDIGKTT
TAAGTGKTQGSTSTVVVAGGSDRIIIEGANQNSTASTPNGGASDSTKAADSGNGFQRISV
TQPGSFSVSGALATPAPSATQTPANVLNETLSIGFINANSSSKSPQYAVLAEVKNGAANS
VIFNGLNKQGDTTKITSIQGFDQGIFTLGRKDVNGNAYYYTNLADRTISLMAGARDATLA
ALASGYQLYLANINSLNKRLGELRNNPNANGLWIRLFNGEQVTRFAVDSKSLYTTLQGGY
DYAFGSEGANNYLGFAISYANAITSTKNFVFENQVFGLKDGNSNALEIALYNSYVQDGAS
KDTKWLNGFYSDSVIKLSIISTSLQMQGQNNKYNTNNAAFTFSEEIGYRFLLGENNEWYI
TPQGEVALGYFNSNQFTQALNNNTLFGKQEAIITVRTRAGASFGYKFDKFTEGKGFKSEI
YLGTFYRGTYISGGQVNLVSAYSATTLTPFVSGNGFLLNLGTNFLIKDHHRVYIDLERSF
GGSFITNYQFNVGYRYSFGENKDYKPIITTQTNHVKKDEAKDAGEREQEQEKETHPLDEN
IQSTHAPETPSQDAPKTKEGEKGAEGSPIENTPTKDAQTPAEQ
NT seq
8412 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaaattccatcaaccttcttgggcggagaaaacctgggcaaatagcagcaca
aataaaaatgattgcacagatatagccaatgctcctagtataggctatttcaaaaggccc
ttaagggcctttggctcctcttgcttcatcgcctctacgttggcatttactctacaaact
gctttggctcaagcaagcactaccacaagcaatgcccccattaccattgactctgataag
aaagaaattcctgaaacgattaatatcactactcccaatcaaacagccattgaattcaaa
cctacaagcgctacaacaaatcctattacagcgcatttaaaacaaaatacctctacagta
acagtgacaagtagtgttactacagggacaaatacaggaattggcctggctagtgatgcg
caatccgatgttggacttatcattacgggtaaaaataatactactagcagtggaggaggt
ggcacagccaccaccccaagcactagtgatggcagcatattatttaaaggattcaaagca
ggggataaaatcatcaattttactggagggagtctgacctttgataaggtttctatagct
gttgatgggcagagcacaactgccacacaaccccaagcacgcagtgcagactcttccgct
ggggctagcggagggactctagctagtggtgcgagttatgggatctacaatggtccagca
gctagcagtggaggaagtggcagcagcaatggcgcaactggcctgatttacaactttggt
actactacttttacaaacatccaaggaaaagagggaggatctgccatcggagtatggatg
gcaaataatgcgactttttctggagtgctaaaatttgcaaacattcaaggagggaatggt
actgctagtagtgatgggggagatgctattgggattggcaaccctgatgcagccagctct
ggcagtggtggcacacagcctcttgtaaccgctaagagcgccccgtcaccaactaccagc
aatcccaagcaagcagtgactttgacattgaataatgcgcaggctagcttccatctcgta
ggcggcaatggcggaagtggcacagcgacagaaggaagtgccactgtaactgctgcaacc
acagctagcactaccacaggagcacaaaatggaaacggcgggaacgcgattgggattgct
ggaagcagtgctagtgatatcatagtcaagtttggcaatggtggcagcgtcatcacccct
gatgttgctaaacctgactctagtcaaaacaactcccttaccttcactctcactggcggt
aatggaggcaagggcaatggtggcaatgctataggcatcatgataaaccaaaacgacaga
ggtgttgttttaaatggccctggaaaagtgattttctcacagcttaccggggggcaaaag
ggctctggtgaaaatgcaactgcgggcaatacctacgtcatcgacaaccaaagcacgaga
acacaaagtaatcctcctggaagtaatatgcctacaggaccagttcctggcagcatcatc
ctagagggaggagcgcagatcattgtcggcacagatcctagcagcacaggctctagtggg
ggaagcggcagtgacacaactactccctatgcagcgattttggtcaatgacactggcaag
actgccaatttcaattttggcgagggcggtgccaccatggtcaccaagctccaccaaaat
agttccatcgagggtatggagctccaatcagggaatgcaaatgttacaggtaattttgca
gtctttggcggccatgtcaaagcaagccaaaatgataacaatcgcgagaacgccataggt
atcaccgtaggcaataataccaccctcactgcaacaggcagcggtctcaatctcgccgtc
atcggaggtaccgcggtaagcatcaatgctcctggtggcagtgctaatggtctgcatctt
ggcgcgagtaatgccataggcattgcgctcaaaggcggaacacttggaggaggtgtgttc
aagctagcggtagcggggggcaatggtgccaaacaaaacactggcagcaataatggtggc
gatgccatagccctccttaatgaagggaatagcaagatcgaaaatagcaacatagagatt
aaactctctgaggggaatgcgggcatccaagtcatcaatccagtagccaccacagaacag
cccgtagtgcaggaacataacagtaatgatggtatcgcatgggcactccaaaaccaatct
ggcacactcacgctaaagaactccacgctcactgtgggtcgtgattctacccctagcgtg
cgtgcgatcatcgcagatggaggtgggggagatatctataacttcggaaccggtgagaat
aaaacaattgcctcactgactctaagccaacccaccacgcaatccctagcatctagcaaa
gatggtgcacaacaaacagagccgaccaatgtcgcagccgtggtaatcaatacgctcagc
gacgcagtcgtattccagggaaatgctagcttttctgtgaccaatgacaagactggcgat
gcctatggcatcatgggatcacaaaaagaattcaagccaacaccaccagcagcgccacca
gcaccgagcgcgccaaaggcaccggctgctgtcgtccttgccagtgacccagctcctgca
gcacctgatgcaaaaaacagcgatcccgcttctgtgttggtctttggtataagcgagaat
tcaaccaaagacaataatgatgctagcaaggtggcaaatatcacctttgcaaacattacc
gcaggcaatgggaacagccaaacaaattccaaaaacggcgggcaagccgtgggcatcgtt
ggcagtcaatatggcagcactgcactcatctttgaaaacaatagcactgtgactttccaa
aacatccaaggtggcaatggaggaagtggcggtaatggaggcaatgccacaggcatccta
gtgggtacgaacaacaaacccgtagtgttgagcggccagggcaagatcatcttctcacaa
ctcacagcaggagcgggtggggctaatgaggcaaatgccaaagcaggcactgctggcatg
acctatgtcatcgacaaccaaaccacccaacccgctagtcctcccaatcctccaaaagct
ccggcaactcagagtgatggaaattatggagtcgtgattgaaaatggtgctcagattgtc
gttggcaccacccccacagagcaaaaccaaggcacagatagcacatcaccctacactggc
atcatagtcaataccaacgccaacacagtgagcaacttcaactttggcaaagcaaccaca
tccaattttgacagcggcacattcatctctagcgaagcacaaaatgtctccacaattggg
atggatgtcaaacagggcaaggtctacgcaaaaggcgtcctcaccgtaggcggcacaccc
actggcactgtggatgacaaaactgtcacagggatacagctcagcggtggtacgctcacc
tctgcaagccctactacagagagtggaaagcaagcagactcgctctccgtctatgccggt
ggctatgctggtggtaaagctcccgcacaagaaaatggcgcaatcactgtaacggcaccc
ggagctatggtgcagggggcgaaaatggcagggcaagataactccactgctaccagcgct
gctgcaggcaacggaaacggtgctgctgcagtaggcatagccatcaatgctggcgctaca
cttggtggtggtacttttaaatttcacgcacaaggtggcaatggcggaagtggcacaggc
aatggtggcaatgctacaggcatcgcgctcgaaggcggtagcatcgatggcagccaagtc
gatgtgattgccataggtggcaatggcgccaaagccactagcgggaccaatggtaatgga
ggcgatgccatcgccatcgcaaactctggcaatagtaccatcaaaaatgccatcatcaat
gtcaatatagccgctggaaaagaaggcagtcaagtgcaagacgcccccaaaccccaagtg
accccaccacaagctaatgactctggtacctcaaacagtcagactagcgataaatctaac
tcctccagcactccttcagcgcaaacaaagggagaccaagcgacaaatagcgctgacacc
tcacccagtagcccaccttcccccgctagatctgaagacagcccagccccacaaagccaa
gtcaatagtgtcgctcaaggctctagccatgacacacaagcaagcggtgctagcggagaa
agtggaggagatagcacacaaggggcgaaacaagctaggagcactgagatcgtactcgca
gcaaacacggcagaaaaggatccggggattgatgcgggagtggggagtgatgcaacacct
ccaaagaatgcagcacaagatgctactgcaggcaaaaatggcttactctatgtgattaaa
aacacatctggcacgctgactctacaaaatagctccatcaatgtcccagctataaactcc
acgcaggcagcaaataacccacccaaagccatcatcacagacaatctaggtggcgacatc
tatgactttggcaaaagcacggtggccagcttcgtcgctgagactgacaatctggctgct
atcgtgcttggggctagcaccaatatgcagggaaatgctagcttttctgtgcatagcaaa
agcggcctagtagctggaatcatagcaaatagcaaagcaactcctagcactcctggggtc
aacgcagtaagtagtggcaattcaactagcccaagcacacagactagccctctcacgctc
acacttggcgctagtactgacacaaatggcaaaaccacaccagccacactaacttttgac
atcgcaggcggtaatactgccagcactccatctgcaacctccgctgcttctccctacaat
gcctatggcatcctagtcaaagagcatagcttcaatctagaaggcaagggggatattatc
tttagcaatgtggggcaaaatggagcgataatcgctgtaggcaccactgtccctggcatc
aatagcactagcactacttccaaagacgctgtgttaccagcaaccaccacaggtgcaact
ctcaatatcaaagaaggcgtgcgcatcatcgcaggatctgccccgagcatgcctagaggt
agtggacgcattggcacgactgtgatttacaacaatctttctggcacaagctatgtattt
ggcgagggtaataactctactaatgtcctggccaatggcactggaaactccacgctcaca
gcctttggtgctgcacagagcgctaatattagcgggaatttagaagtcagaaataccgac
agctctgacagccccaatggtacagggactttcacaggtataagcatcagcggtggcgtt
gaggatacggtgctaaatattgtaggcgccaccaaggtcagtgtaaatgccaacccagct
acatctacacccgctcctgcacctcaaactcaacctagcaatcagggcactactggaagt
agtggaagcacctctactccaacaccctccaagccagccccacaagccgatgacacaggc
aaagacaccaccaaggtagccgacgctgcaggtaaaacctcagaaagccaaccccaatcc
caatcccagcccaccgctggaagcacagaccaaactcaaggctcttccactcctgaagta
aaatccagcgatcagacccaaccagatcctaccaaaactatagcgcttgcaacagtgtta
gcaagcactacaaatagccctatcaatgtcgtggggatcgagaccaagggaaatggtggc
accataaaccttgatgcaaatctcatcatggatcttacaggcaacaccgccacaggtatc
aaaatcaatggcggtgccctcaaactctctgcaggtcctgcaagcaccacaggagcaaag
acaggaagtacagatgtcagacaactcatcattcatgccacttctactaaagccggtagt
gctggcccagtgattgtagatggaagtgtgggaaccctcattgtaggcaagaatgtcagt
atcgtaggcagcaataatactagtgctgtgagctttagcacaactgctgggaatggaaaa
gatagcagtggctctactggaagcaataatacacaggctagcctctatggtaatgtggct
aatgcacaatttaagctaggaaatacaatcctagatagcaataactatggaatctatgca
gcacaaaatactaacatctccctagcagcaaacaccacgctcaatatcacagcacaacaa
gcctttggggcagcaaataatgcaaatctcaatgtggcattggtaaatagatctgtgatt
gagatccatggtcagggtgggaccatcaacaccctaagctcagataaggacacttatgga
gctgtggtctctctagcaggaaataaacaagagcgaagcataaataccaccttccgcaca
ctcaccatcaaaaacatcactgcaaatcacgttgatttcaaagtaatgggcaccaccaaa
gatttaggaactggcaaaaacaatgcctttgctagcatagaggatattggcaaaaccacc
acagcagcaggcactggcaagactcaaggcagtactagcacagttgtagttgctggagga
agtgataggatcatcatagaaggtgccaatcaaaatagcactgcaagcactcccaatggt
ggagctagtgattctaccaaggcggcagatagtgggaatggatttcagagaatttctgtt
acccagccaggctccttctctgtcagtggcgctctagctacccctgcgccttcagctact
caaacccctgcaaatgtgctcaatgagacacttagcattggatttattaatgccaatagc
tcaagtaagagcccccaatatgcagtccttgcagaagtcaaaaatggcgcagcaaattct
gtgatcttcaatggcttgaataagcaaggagatactacaaaaatcacaagtatccaaggc
tttgatcaaggcatctttactttgggtcgcaaagatgtaaatggcaatgcttattattac
accaatctagcagatagaaccattagcctcatggcaggagcaagggatgctactctagca
gcacttgctagtggatatcagctctatctagccaatatcaatagcctcaataaacgccta
ggagagcttagaaataatcccaatgccaatggtctatggattaggctctttaatggtgag
caggttacaagatttgcagtagatagtaaatctctctacaccacgctgcaggggggttat
gactatgcctttggaagtgaaggagccaataactatctaggatttgccattagctatgcc
aatgcaatcactagcactaagaactttgtgtttgaaaatcaagtctttggactcaaggat
ggcaatagcaatgcactggaaattgcactgtataactcctatgtacaagatggtgcaagc
aaagataccaaatggctcaatggattttatagtgatagtgtgataaagctaagcatcatt
tctacatccctgcagatgcaaggacagaataacaaatacaacaccaataatgctgccttc
accttctcagaggagattggttatcgcttcttgctaggagagaataatgaatggtatatc
acaccacaaggagaggtggcactgggttatttcaatagcaatcaattcacccaagcgctc
aataataacactctctttggcaagcaggaagccattattacagtgcgaactcgtgcaggt
gctagctttggctataagtttgataaattcacagagggcaagggctttaaatctgagatt
tatctaggtacattctatagaggtacctatatcagtggtggacaggtcaacctagtatct
gcatattctgccactacactcactccctttgtctcaggcaatggcttcttgctcaatctg
gggactaacttcctcatcaaagaccatcaccgagtctatattgacctagagagaagcttt
ggtggctccttcatcaccaattatcaattcaatgtgggatatcgctatagctttggtgag
aataaggactacaagccgataattaccacacaaaccaaccacgttaagaaggatgaagcc
aaagacgctggagagagggagcaagagcaggaaaaagagacccatccactcgatgaaaac
atacagagcacacatgctccagagactccatcacaagatgctccaaagactaaggaggga
gaaaaaggagcagaaggatcacctatagagaatacgcctactaaggatgcacaaacacca
gcagagcaataa
DBGET
integrated database retrieval system
