Helicobacter mustelae: HMU01190
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Entry
HMU01190 CDS
T01191
Name
(GenBank) putative autotransporter protein
Organism
hms
Helicobacter mustelae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SO_alpha_A3
Motif
Other DBs
NCBI-ProteinID:
CBG39381
UniProt:
D3UFW0
LinkDB
All DBs
Position
154414..160203
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AA seq
1929 aa
AA seq
DB search
MNKKFHQPSWAEKTWANSSTNKNDCTDIANAPSIGYFKRPLRAFGSSCFIASTLAFTLQT
ALAQASTTTSNAPITIDSDKKEIPETINITTPNQTAIEFKPTSATTNPITAHLKQNTSTV
TVTSSVTTGTNTGIGLASDAQSDVGLIITGKNNTTSSGGGGTATTPSTSDGSILFKGFKA
GDKIINFTGGSLTFDKVSIAVDGQSTTATQPQARSADSSAGASGGTLASGASYGIYNGPA
ASSGGSGSSNGATGLIYNFGTTTFTNIQGKEGRTGGGGVIRNPGTATTPDSQNGESGGSA
IGVWMANNATFSGVLKFANIQGGNAGAAINGGKGGNGGNAIGIQGNDTSNVALHFGNGTA
SSDGGTKQTSTANQIIFEKLIAGNGGAGNTGTSGDGGNAIGIFLGEQSKGITLAGRGQIL
FGHMEQGDTSAGAETGKNGGVYIIKNDSTTTAGSGASGGAPTPVNSNVGGGNLTIEDGAQ
IVVGSMPTGSTNANTYTGIVVNTTDPSFVSQFQFGSKNSTLVIRTKESGSLVGMNITQGA
VQAQGNFLAGGAPNTTESVENTVVSGISIHSGGALFSDRAGSNDNILYVFADGFLGNAGS
SVKGESTTGGIGGGGGSAIGIALKGGTLGSGKFDLIVKGGDGGNGGSGQMGGRGGNATAI
SNEGNSKIINSNIQVGTLEAGQGGKTGNGSDGSASGARTGSSGAAYVLQNLSGTLTMQNS
TITVGVKPIPGFEAIIQDEMGKYIYDFGSGSAKTIASFSSSDLSSGGSDSASSTKAPANP
SLAGVLLGTGKTTFQGNAEFTVANTKGVAVGILGVATPPSAPTASKPTPAPAPQTQPSDQ
GPTGSSGSTGVQSGEAGRSDATSGQTAQTTQGSQDSTTTTLAQTERVAPPAALIPNTSTT
LVLGGENETIPTQLTFNLSGEKSDSGAGNAAGNSDGATPFYSYGVLVKENHTLNLAGRGT
IVFTSLGSNGAVIAVGVGGNDVTSSNGATKDPSTNGGGSLIIKEGVRIIAGSAGPSVKDG
NPVIYSNLSGANYQFGNSSNNTVILANGGASSKLVGLGVAQSADISGNLEVKNAASNSNG
SGSFTGISLAGAKAELNVVGATAIAVSGNPTVSVVQGGGAQSTRAVVLAGAGQTSNINVV
GIRGGGNITLNDNLALLLIGNTARGIDPDGGALKLSAGPASTTGAKTGSTDVRQLIIHAT
STKAGSAGPVIVDGSVGTLIVGKNVSIVGSNNTSAVSFSTTAGNGKDSSGSTGSNNTQAS
LYGNVANAQFKLGNTILDSNNYGIYAAQNTNISLAANTTLNITAQQAFGAANNANLNVAL
VNRSVIEIHGQGGTINTLSSDKDTYGAVVSLAGNKQERSINTTFRTLTIKNITANHVDFK
VMGTTKDLGTGKNNAFASIEDIGKTTTAAGTGKTQGSTSTVVVAGGSDRIIIEGANQNST
ASTPNGGASDSTKAADSGNGFQRISVTQPGSFSVSGALATPAPSATQTPANVLNETLSIG
FINANSSSKSPQYAVLAEVKNGAANSVIFNGLNKQGDTTKITSIQGFDQGIFTLGRKDVN
GNAYYYTNLADRTISLMAGARDATLAALASGYQLYLANINSLNKRLGELRNNPNANGLWI
RLFNGEQVTRFAVDSKSLYTTLQGGYDYAFGSEGANNYLGFAISYANAITSTKNFVFENQ
VFGLKDGNSNALEIALYNSYVQDGASKDTKWLNGFYSDSVIKLSIISTSLQMQGQNNKYN
TNNAAFTFSEEIGYRFLLGENNEWYITPQGEVALGYFNSNQFTQALNNNTLFGKQEAIIT
VRTRAGASFGYKFDKFTEGKGFKSEIYLGTFYRGTYISGGQVNLVSAYSATTLTPFVSGN
GFLLNLGTNFLIKDHHRVYIDLERSFGGSFITNYQFNVGYRYSFGENKKYKPRIGVQTPN
SIKKDESST
NT seq
5790 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaaattccatcaaccttcttgggcggagaaaacctgggcaaatagcagcaca
aataaaaatgattgcacagatatagccaatgctcctagtataggctatttcaaaaggccc
ttaagggcctttggctcctcttgcttcatcgcctctacgttggcatttactctacaaact
gctttggctcaagcaagcactaccacaagcaatgcccccattaccattgactctgataag
aaagaaattcctgaaacgattaatatcactactcccaatcaaacagccattgaattcaaa
cctacaagcgctacaacaaatcctattacagcgcatttaaaacaaaatacctctacagta
acagtgacaagtagtgttactacagggacaaatacaggaattggcctggctagtgatgcg
caatccgatgttggacttatcattacgggtaaaaataatactactagcagtggaggaggt
ggcacagccaccaccccaagcactagtgatggcagcatattatttaaaggattcaaagca
ggggataaaatcatcaattttactggagggagtctgacctttgataaggtttctatagct
gttgatgggcagagcacaactgccacacaaccccaagcacgcagtgcagactcttccgct
ggggctagcggagggactctagctagtggtgcgagttatgggatctacaatggtccagca
gctagcagtggaggaagtggcagcagcaatggcgcaactggcctgatttacaactttggt
actactacttttacaaacatccaaggaaaagagggaagaactggaggcgggggtgtaata
cgcaatcctggcactgccactactcccgattctcaaaatggggagagcggaggatctgcc
atcggagtatggatggcaaataatgcgactttttctggagtactgaagtttgcaaacatt
caaggagggaatgctggagctgcgattaatggaggcaagggaggcaatggaggcaatgct
attgggatccagggtaatgatacttcgaatgtagctcttcactttggaaatggtactgct
agtagtgatggtggtactaagcaaactagtacggccaatcaaattatttttgaaaaactc
attgctggcaatgggggcgctggtaatacagggactagtggtgatggtggcaatgctatt
gggatttttttgggtgagcagagcaagggcattacccttgctggtaggggacagattctc
tttgggcatatggagcaaggggatacatcagcaggggcagagacgggaaaaaatggcggt
gtgtacatcatcaaaaatgatagcacaactactgctggcagtggggctagtggaggagcc
cccactcctgtgaatagtaatgttggcggggggaatctgacaatcgaggatggtgcccag
attgttgtagggagtatgccaacaggaagcacaaatgcaaatacctatacagggattgtt
gtgaatactactgatccttctttcgtctctcaatttcaatttggtagcaaaaattctact
ttggttatcagaacaaaagaaagcggatctttggtcggaatgaatattactcagggtgct
gtgcaagctcagggaaattttttagctggtggtgcacccaatacaacggagtctgtggag
aatacagtggtcagcggtatcagcattcatagtggcggtgcactcttctctgatagagca
ggaagcaatgataatatattgtatgtttttgcagatggttttcttggcaacgcagggagc
agtgtaaaaggtgaaagcaccacaggaggaattggaggaggtgggggaagtgccataggc
atcgcgctcaaaggtgggacacttggtagtggaaaatttgatctgattgtcaagggtggc
gatggtggaaatggaggaagtgggcagatgggagggaggggtggcaatgctactgcgatc
tctaatgaaggaaatagcaagattataaactctaacatacaagttggaacccttgaagca
gggcaaggtggaaaaactggaaatggaagcgatggaagtgctagtggggctagaactgga
agcagtggcgctgcatatgtactccaaaatctctctggcacgctcacaatgcaaaatagc
acgattactgtgggagtaaaaccaattcctggttttgaagcaatcatccaggatgaaatg
ggaaaatatatctatgattttggtagtggaagtgctaaaaccattgctagcttttcttct
agtgatctttcctctggaggaagtgattctgcaagctctactaaagcacccgcaaatcca
agtcttgctggtgtgctactaggtactggcaaaacaaccttccaaggaaatgcagagttt
actgttgctaatactaagggagtggccgttggtattttgggtgttgctactcctccttct
gcacccacagcgagcaagcctacacccgctcctgcacctcaaactcaacccagcgatcag
ggtcctactggaagtagtggaagcactggagttcaaagtggtgaagctggaagatcggat
gcaactagcgggcagaccgctcaaactacgcaagggagtcaagattccactaccactact
ttggcacaaacagagagagtagcgcctcccgcagcgctaattcctaatacaagcactacg
cttgtattaggtggggaaaatgaaacaattccaacgcaacttacctttaatctctctggt
gagaaatctgacagtggtgctggcaatgcagcaggaaatagcgatggcgctaccccattt
tatagctatggtgttttagtgaaggagaatcacactctaaaccttgcaggtagaggaaca
attgtctttaccagtcttggaagcaatggagcagtaattgccgtaggagtggggggcaat
gatgtaacttcttcaaatggcgcaacaaaggatccctcaactaacggtggaggttctctc
atcatcaaagaaggcgtgcgcatcatcgcaggtagtgcaggaccaagtgttaaggatggg
aatcctgtgatttatagcaatctttcaggtgcgaactatcaatttggaaatagtagtaat
aataccgttatccttgctaatggtggcgctagctctaagctagtggggcttggtgtagca
cagagcgctgatattagcgggaatctagaagtcaaaaatgctgctagtaatagcaatgga
agtggaagttttacggggatttctttggcgggagcaaaggcggaattgaatgttgtaggc
gctactgcgattgcggtaagtggaaatcctactgtctcggttgttcaaggtggcggtgct
cagtctactagggctgttgtgttagctggtgctggacaaacaagcaatattaatgtggta
gggattaggggtggtggaaatatcactctcaatgacaatcttgcactcctgcttatagga
aatacagctagggggatcgatccagatggcggtgccctcaaactctctgcaggtcctgca
agcaccacaggagcaaagacaggaagtacagatgtcagacaactcatcattcatgccact
tctactaaagccggtagtgctggcccagtgattgtagatggaagtgtgggaaccctcatt
gtaggcaagaatgtcagtatcgtaggcagcaataatactagtgctgtgagctttagcaca
actgctgggaatggaaaagatagcagtggctctactggaagcaataatacacaggctagc
ctctatggtaatgtggctaatgcacaatttaagctaggaaatacaatcctagatagcaat
aactatggaatctatgcagcacaaaatactaacatctccctagcagcaaacaccacgctc
aatatcacagcacaacaagcctttggggcagcaaataatgcaaatctcaatgtggcattg
gtaaatagatctgtgattgagatccatggtcagggtgggaccatcaacaccctaagctca
gataaggacacttatggagctgtggtctctctagcaggaaataaacaagagcgaagcata
aataccaccttccgcacactcaccatcaaaaacatcactgcaaatcacgttgatttcaaa
gtaatgggcaccaccaaagatttaggaactggcaaaaacaatgcctttgctagcatagag
gatattggcaaaaccaccacagcagcaggcactggcaagactcaaggcagtactagcaca
gttgtagttgctggaggaagtgataggatcatcatagaaggtgccaatcaaaatagcact
gcaagcactcccaatggtggagctagtgattctaccaaggcggcagatagtgggaatgga
tttcagagaatttctgttacccagccaggctccttctctgtcagtggcgctctagctacc
cctgcgccttcagctactcaaacccctgcaaatgtgctcaatgagacacttagcattgga
tttattaatgccaatagctcaagtaagagcccccaatatgcagtccttgcagaagtcaaa
aatggcgcagcaaattctgtgatcttcaatggcttgaataagcaaggagatactacaaaa
atcacaagtatccaaggctttgatcaaggcatctttactttgggtcgcaaagatgtaaat
ggcaatgcttattattacaccaatctagcagatagaaccattagcctcatggcaggagca
agggatgctactctagcagcacttgctagtggatatcagctctatctagccaatatcaat
agcctcaataaacgcctaggagagcttagaaataatcccaatgccaatggtctatggatt
aggctctttaatggtgagcaggttacaagatttgcagtagatagtaaatctctctacacc
acgctgcaggggggttatgactatgcctttggaagtgaaggagccaataactatctagga
tttgccattagctatgccaatgcaatcactagcactaagaactttgtgtttgaaaatcaa
gtctttggactcaaggatggcaatagcaatgcactggaaattgcactgtataactcctat
gtacaagatggtgcaagcaaagataccaaatggctcaatggattttatagtgatagtgtg
ataaagctaagcatcatttctacatccctgcagatgcaaggacagaataacaaatacaac
accaataatgctgccttcaccttctcagaggagattggttatcgcttcttgctaggagag
aataatgaatggtatatcacaccacaaggagaggtggcactgggttatttcaatagcaat
caattcacccaagcgctcaataataacactctctttggcaagcaggaagccattattaca
gtgcgaactcgtgcaggtgctagctttggctataagtttgataaattcacagagggcaag
ggctttaaatctgagatttatctaggtacattctatagaggtacctatatcagtggtgga
caggtcaacctagtatctgcatattctgccactacactcactccctttgtctcaggcaat
ggcttcttgctcaatctggggactaacttcctcatcaaagaccatcaccgagtctatatt
gacctagagagaagctttggtggctccttcatcaccaattatcaattcaatgtgggatat
cgctatagctttggtgagaataagaaatataaaccaaggattggtgtgcaaacaccaaat
agcatcaaaaaagatgagagtagcacataa
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