Helicobacter mustelae: HMU01500
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Entry
HMU01500 CDS
T01191
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha chain
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
hms
Helicobacter mustelae
Pathway
hms03030
DNA replication
hms03430
Mismatch repair
hms03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hms00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HMU01500 (dnaE)
03430 Mismatch repair
HMU01500 (dnaE)
03440 Homologous recombination
HMU01500 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hms03032
]
HMU01500 (dnaE)
03400 DNA repair and recombination proteins [BR:
hms03400
]
HMU01500 (dnaE)
Enzymes [BR:
hms01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HMU01500 (dnaE)
DNA replication proteins [BR:
hms03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HMU01500 (dnaE)
DNA repair and recombination proteins [BR:
hms03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HMU01500 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
MoCF_biosynth
Utp11
Motif
Other DBs
NCBI-ProteinID:
CBG39412
UniProt:
D3UFZ1
LinkDB
All DBs
Position
189769..193323
Genome browser
AA seq
1184 aa
AA seq
DB search
MSYTHLHLHTEYSMLDGANKIKNLIQRLKELGMSSVSMTDHGNMFGAIEFYKSMKAEGIK
PIIGMEAYVHNYEELNSKEGKQRFHLCLYAKNEVGYKNLMFLSSMAFIEGFYYYPRISKK
LLREHSEGLVASSACLGGEVNFHLNTSERNKKRGAKGIEMAKEVALEYRDIFGEDFYLEI
MRHGINHQENIDDLIIRISQETGIKLIATNDAHYISQKDHKMQEVVQTLGQGKTLNDPNR
LKHTVFEFYVKSSEEMERIFADIPEALRNTQEIVEKCNLEIELKDEKTNPPTPPTFIFTK
EYAKLEGQEIDNDADFFAYKSRQGLEEYLKIIPQEKHQIYRDRLEEEIRIITQMKFPGYM
LIVWDFIHFAKSQNIPVGPGRGSAAGSLVAFCLKITDIDPMKYNLLFERFLNPERVSMPD
IDTDFCQRRRGEVIEYMIQKYGKYNVAQVITFGKLLAKNAIRDVARVLDMPLKDADAFAK
LIPNQLGIKLEDAHALEPKIEEFMNQNPKARDVWEYALQLEGLNRNAGKHAAAIVLDSEK
ELWHKTPLCTVGKSDDSLVTQYSMKYLEPVDLIKFDFLGLKTLTVVHDALELIKKRYGKE
IDFLSVDVDDKKVYETIQSGDTLGIFQIESSMFQGLNKRIKPSNFEDIIAIIALGRPGPM
ESGMVDDFINRKHGLEEITYMFDALEPILKPTYGTIVYQEQVMQIVQTIGGFSLGGADLV
RRAMGKKIKEEMERLKSDFATGAEKNGFDRAKAEDLWELIVKFAGYGFNKSHSAAYAMIT
FQTAYLKTYYKEEFMAALLSSESGKIESVAKYINEVKKMDMDFMSPHVNISEKNFGVANF
EHEGMGIKKIIFGLSAIKGVGDEPIQNIISVREKGGDFKSLEDFISRVDFSKITKRVLEP
LIKSGGLDGLGYSRACMLKNLDAICEAGRRKDKAKESMAQGLFGGLEDEVEQNVRFDFSN
FEEFPLRDLLDLEFECLGIYVSGHPLEEYRESIEGLQGFVPSVSLGEVEEDSYCLIAGKV
SEITRKMSKSNKPYGYVNLLDLYGKIEIMFFEKQLLELEKFDLEQPIVLKCKIERDDEGY
QVRIIKILTLKEAQEEKIDVGYKKDSALLEGEMDSCCPLVLHLDHNAPKDIFDSLAQSIE
RNKGNRELRIIIKDKYETYMFITEKKVDSAITQECADLEWSSWK
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atgagctatacacatctgcatctgcatacagaatattccatgcttgatggagccaataag
attaagaatctcatccagaggctcaaggaactgggcatgagcagtgtgagcatgactgat
catggcaatatgtttggagcgattgagttttacaaaagcatgaaggcagaggggattaag
cccatcattggcatggaggcctatgtgcataattatgaagagctaaattccaaggagggc
aaacagagatttcatctttgtttgtatgctaaaaatgaagtagggtataagaatcttatg
tttcttagctcaatggcatttattgagggtttttattattatccaaggattagcaagaag
ctcttgcgtgagcatagcgaggggcttgtagcaagctctgcttgtttgggtggagaggtg
aatttccatctaaatacaagcgagcgcaataaaaagcgcggtgctaagggcatagagatg
gccaaagaagtggccttagaatatcgggatatttttggagaggatttttatctagaaatt
atgcgtcatggaatcaatcatcaagaaaatattgatgatttgattatccgtatctcgcaa
gaaacaggaattaagctcattgccaccaatgatgcccattatatttctcaaaaagaccat
aaaatgcaagaggtggtgcaaactcttgggcagggaaaaaccctcaatgatcccaatcgc
ttgaaacatacagtgtttgaattttatgtaaagtcttctgaggaaatggaaaggattttt
gcagatattccagaggcattgaggaatacgcaagaaattgtagagaaatgtaatcttgaa
atagagctcaaagatgaaaaaaccaatcctcccacccctccgacatttatttttaccaaa
gaatatgccaagcttgagggtcaagagattgacaatgatgcagatttttttgcttacaaa
tctaggcaagggctagaagagtatttgaaaattattccccaggaaaaacatcagatctat
cgcgatcgcctagaagaagagattaggattatcacgcaaatgaagtttcctggatacatg
ctcattgtttgggattttattcattttgcaaagagtcaaaatatccccgtgggtccaggg
cggggtagtgcggcaggaagtttggtggcattttgtttgaaaattacagatattgatccc
atgaaatataatttactttttgagcgttttctcaatcctgagcgcgtttccatgcctgat
attgatacggatttttgtcagcgcaggcgtggtgaggtgattgaatatatgatccaaaaa
tatggaaaatacaatgtcgcacaagtgattacttttggtaagttgcttgccaaaaatgca
atccgtgatgtggcacgtgtgttggatatgccgcttaaagatgctgatgcatttgccaag
ctcatccccaatcaattgggaatcaagctagaagatgcacatgccctagagccaaaaata
gaggaatttatgaatcaaaacccaaaggcacgggatgtgtgggaatatgccctgcagctt
gagggtctcaatcgcaatgcagggaaacatgcagctgctattgttttggattctgaaaag
gaattatggcataagacgcctttatgcaccgtagggaaaagtgatgattctttggtgacg
caatattctatgaaatatcttgaacccgtggatttaatcaaatttgactttttggggtta
aagacccttacggtcgtgcatgatgccctagagcttatcaaaaagcgctatggcaaagaa
atcgattttttgagcgtggatgtggatgataaaaaagtctatgagaccattcaaagtggg
gatacgctcgggatattccaaatcgaatcctcgatgttccaaggactcaataagcgcatc
aagcccagcaattttgaagacatcattgccatcattgcgttggggcgaccagggcccatg
gagtctggaatggtggatgacttcatcaatcgcaaacatggcctagaggagattacatac
atgtttgatgcacttgagcccattctcaaacccacttatggcacgattgtgtaccaagag
caagttatgcagattgtgcagacaattgggggattttccctgggtggagcagatcttgtg
cgtcgtgcgatgggtaaaaaaatcaaagaagagatggagcgcttgaagagtgattttgcc
actggtgcagaaaaaaatggctttgatcgcgctaaagcagaggatttgtgggagttgatt
gtaaaatttgcgggctatggttttaataaatcccactctgctgcatatgcaatgatcaca
tttcagactgcttatctcaaaacctattacaaagaggaatttatggcagctttgcttagc
agcgaatctggcaagattgagtctgtggccaagtacattaatgaagtgaaaaaaatggat
atggatttcatgtccccgcatgtaaatatttctgaaaaaaattttggcgtagcaaacttt
gagcatgagggcatggggattaaaaagattatttttgggctttctgccatcaagggggtg
ggtgatgaacccattcaaaacatcatctctgtgcgagaaaaaggaggggattttaaaagc
ttagaggattttatctcgcgtgttgatttttctaaaatcaccaagcgtgtgctagagccc
ttgataaaatctggtgggctagatggcctgggatatagtcgtgcatgtatgttaaaaaat
cttgatgccatttgtgaggcagggaggcgcaaggacaaggccaaagaaagcatggcccaa
gggctatttggagggctagaagatgaggtggagcaaaacgtgcgttttgatttttcaaat
tttgaggaatttcccttgcgcgatttgctggatttggaatttgaatgccttgggatctat
gtctcagggcatcccttggaggaatatcgcgagagcattgaggggctacagggctttgtg
cccagtgtgagtctgggggaagtggaggaagattcttattgcctgattgcagggaaggtg
tctgagattactcgcaaaatgagtaaaagcaacaaaccctatggatatgtgaatctcttg
gatttgtatgggaaaattgagattatgttttttgaaaaacaactcttggagctagaaaaa
tttgatctagagcagcccatcgtcttgaagtgtaagatcgaaagagatgatgagggctat
caggtgcgcatcattaagatcctcaccctcaaagaagcacaggaagaaaagattgatgtg
ggatataagaaggattcagcattattggagggggagatggattcttgctgtcctttggtt
ttgcatctagaccacaatgcccccaaagatatttttgatagccttgcccagagcattgag
cgcaataagggcaatcgtgagctaagaatcatcatcaaggataaatacgagacttatatg
ttcatcacagaaaaaaaggtagattctgctatcacgcaggaatgcgcggatctagagtgg
tcgagttggaaatga
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integrated database retrieval system
