Helicobacter mustelae: HMU12380
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Entry
HMU12380 CDS
T01191
Symbol
truD
Name
(GenBank) putative tRNA pseudouridine synthase D, TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
hms
Helicobacter mustelae
Brite
KEGG Orthology (KO) [BR:
hms00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hms03016
]
HMU12380 (truD)
Enzymes [BR:
hms01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
HMU12380 (truD)
Transfer RNA biogenesis [BR:
hms03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HMU12380 (truD)
Prokaryotic type
HMU12380 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
DUF4738
Motif
Other DBs
NCBI-ProteinID:
CBG40492
UniProt:
D3UJ17
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All DBs
Position
1358350..1359462
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AA seq
370 aa
AA seq
DB search
MQERIYALNHAPIPFYFSQNARDFIVREIPLYAFSNKGEHHILHVRKKGLSTQEMLKILS
NVLGCRIQEFGYAGLKDKSATTTQYLSINKKFTKDLAIHLPVLKEQGIKILDETYHDNKI
KLGHLKGNSFFIRLKKITPLLAMQLENAIQKIRTQGLPNYFGYQRFGKYQDNHKEGQKIA
HKQKKYRNKTLQNFLLNSYQSELFNQWLCRRIKLAKIFAHFSTKEIPRALKLEGFDLEPQ
SIPLLKNQPHFFKILKGDVLEHYPFGRLFCTNLDENDVMRFFQKSLAPTGLLCGRGAFLA
QDDARKIEELFIDDKMDCNSTRRYAWVWPEEVTYRFLEKEAWFEMGFYLPKGSYATIFLE
ELAHQEISIH
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaaagaatctatgccctaaaccacgctcccattcccttttatttctctcaaaat
gcaagagattttatcgtaagagaaatcccactctatgcctttagcaacaagggagagcat
catatcttgcacgtccgaaaaaaaggcctaagcacccaggaaatgctaaaaatccttagc
aatgttttgggatgcaggatccaagaatttggatatgcgggactcaaagacaaatctgcc
actaccacgcaatatctctccattaataaaaaatttaccaaagatctagccatccatctc
cccgtcctcaaagagcaggggatcaaaatccttgatgagacctatcatgacaataagatt
aagctcggtcacctcaagggaaattccttttttatccgtctcaaaaaaatcactccgctg
cttgccatgcaattagaaaatgctattcaaaaaattcgcacacaaggcctgccaaattac
tttggctatcagcgctttggcaaataccaagacaatcataaagagggccaaaaaatcgcg
cataagcaaaaaaaatatcgcaataaaaccctgcaaaatttcctgctcaatagctatcaa
agcgaacttttcaatcaatggctctgcagacgcatcaaacttgccaaaatttttgcgcac
ttctctacaaaggaaatcccaagggcgcttaagctagaaggctttgacctagagcctcaa
agcatccccctcctcaaaaaccaaccccattttttcaaaatcctcaagggtgatgtctta
gagcattatccatttgggaggcttttttgtaccaatttagatgaaaatgatgtgatgcga
ttttttcaaaaatccctcgctcccacaggcttgctctgtggaaggggggcatttttggca
caagatgatgcgcgaaaaattgaggaattgttcattgatgataaaatggattgcaatagc
actagacgctatgcatgggtatggccagaggaggttacttatcgctttttagaaaaagaa
gcatggtttgaaatggggttttatctgccaaagggaagctatgctacaatctttttagaa
gaactcgctcatcaagaaatttcaatccattga
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