Hymenobacter monticola: MTP16_01405
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Entry
MTP16_01405 CDS
T08220
Name
(GenBank) type VI secretion system baseplate subunit TssF
Organism
hmt
Hymenobacter monticola
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Gene cluster
GFIT
Motif
Pfam:
T6SS_TssF
COG2
Motif
Other DBs
NCBI-ProteinID:
UOE34323
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Position
309563..311437
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AA seq
624 aa
AA seq
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MLPPPSFPTPAATDFSKASIKSRLTRQAAELWGYGEADLDGFDPLVHVLLEACAVEFEKI
GQELHSTQDRLVERLATLLNPDVVDAPHPAHAVAQARAREALVQLPNDAQFVFAPPTVGR
QAAGQELFFSPLQGTRLVSGAVRCLATDATVWQVEANGQKRVVAQAASPAPTEHRRLWIG
LSLPAEGVKISDLTFYFDWLNEPRRAAYAAFLPGEQWLLGRYELQASQGLPEPPAGVGAP
AGSLNGEYDFLQRVEQQVRELYAPAFVQLSGPASALAAYAPRPYPAELADSFQAATELQG
LTQPLTWLEVRFAHALPPEAFEQLVCALNCFPVLNRRLHKVLFRLQPALNLFPLVSEEPF
LAIRDVYSLSNVAYRPTTLSDLSEGATDTYTLRTHGVGRFDTRTGREALRELLELLRDES
SAFTAAGTDFVGSILRELDQNLARLEERLDRTRAAEQPVPYVLLRPKNVNDSVYLEYWSS
NGEAANRLAAGSQLRIHDGHFIDEVRLLTTTSGGRERPRPEERTHALRRNLLARNRLVTL
ADIKAACWAELGPQLAAVHVEKAFQTGSTPTAGFVRCIRVMLTPAEPTRLSAPEWQRASQ
ELHTVLSGQSALNMPYEVVVKTAG
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
gtgctgcctccgccgtctttccccacgcccgccgccaccgatttcagcaaagccagcatt
aagagccgcctcacccgccaggcggccgagctgtggggctacggcgaggccgacctcgac
ggcttcgacccgctggtgcacgtgctgctcgaagcctgcgccgtggaatttgagaaaatt
ggccaagagctgcacagcacgcaggaccggctggtggagcgcctggccaccctgctgaac
cccgacgtggtggacgccccgcacccggcccacgccgtggcgcaggcccgcgcccgcgag
gcgctggtgcagctgcccaacgacgcgcagtttgtgtttgcgccgcccaccgtgggccgc
caggccgccggccaggaactgtttttttcgccgctgcaaggcacgcgcctcgtgagcggg
gccgtgcgctgcctggccaccgatgccaccgtgtggcaggtggaagccaacggccagaag
cgcgtggtggcccaggccgccagccccgcccccaccgagcaccgccgcctctggataggc
ctgagcctcccggccgaaggcgtcaaaatcagcgacctgacgttttacttcgactggctg
aacgagccgcgtcgggccgcctacgccgcctttttgcctggcgagcagtggctgctgggc
cgctatgaattgcaagccagccagggcctgcccgagccgcccgccggcgttggcgccccg
gccggctccctcaacggggagtatgatttcctgcagcgcgtagagcagcaggtgcgggag
ctgtacgcaccggcctttgtgcagctgagcggcccggcaagcgcgctggcagcctacgcg
ccccgcccctaccctgccgagctggccgattcctttcaggctgccaccgagctgcagggc
ctcacgcagccgctgacgtggctggaagtgcgctttgcccacgccctgccgcccgaggcg
ttcgagcagctggtgtgtgccctcaattgcttcccggtgctcaaccggcgcctgcacaag
gtgctgtttcggctgcagccggccctcaacctgtttccgctggtgagcgaggagccgttt
ctggccattcgcgacgtctacagtctcagcaacgtggcttaccgccccaccaccctcagt
gacctgagcgagggcgccaccgatacctacacgctgcgcacccacggcgtgggccgcttc
gacacccgcaccggccgcgaagccctgcgcgagctgctggagctgctgcgcgacgaaagc
agcgccttcacggccgccggcaccgattttgtgggctctatcctgcgcgagctcgaccag
aacctggcccgtcttgaggagcgcctcgaccgcacgcgcgccgccgagcagccggtgcct
tacgtgctgttacgccccaaaaacgtgaacgacagcgtatacctcgaatactggtcgagc
aacggcgaagcggccaaccgcctggctgccggcagccagctgcgcatccacgacggccat
tttattgacgaagtgcgcctgctcaccaccaccagcggcgggcgcgagcggccccgcccc
gaggaacgcacccacgccctgcgccgcaacctgctggcccgcaaccgcctcgtgaccctg
gccgatattaaggccgcctgctgggccgagctgggcccgcagctggccgccgtgcacgtc
gaaaaggctttccagaccgggagcacgcccacggcgggctttgtgcgctgcatccgggtg
atgctcacgccggccgagcccacccgcctaagcgcgcccgagtggcagcgcgccagccaa
gagctgcacacggtgctatcgggccagtcggccctgaacatgccgtacgaggtggtggtg
aaaacggcgggttga
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