Hymenobacter monticola: MTP16_02120
Help
Entry
MTP16_02120 CDS
T08220
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
hmt
Hymenobacter monticola
Pathway
hmt03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hmt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MTP16_02120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hmt03021
]
MTP16_02120
03400 DNA repair and recombination proteins [BR:
hmt03400
]
MTP16_02120
Enzymes [BR:
hmt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MTP16_02120
Transcription machinery [BR:
hmt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MTP16_02120
DNA repair and recombination proteins [BR:
hmt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MTP16_02120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
UOE34461
LinkDB
All DBs
Position
complement(480264..481253)
Genome browser
AA seq
329 aa
AA seq
DB search
MSILAFQMPEKVVMEKSDDFTGTFEFKPLEKGYGVTIGNALRRILLSSLEGFAITSVRTN
SVLHEFSTIEGVIEDMSEIILNLKMVRFKKVSDAISDKITVRVKGQDTFSGADIAKFASG
FEVLNPDHVIAHLDPSVELEMELTIARGRGYVPADENKPADQVFGQIAIDAIYTPIKNVK
YSIENTRVEQKTDYEKLVIEIQTDGSIHPEDALKGAANILIQHFMLFSDNTMTLEGPRVT
EDEPIDEETMQMRKMLKTPLEDMELSVRAKNCLKAADIKTMGELVQLEIADMMKFRNFGK
KSLTELENLVEERGLEFGMDLSKYRLDEE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatcttagcttttcagatgccggagaaagtggtgatggagaaatccgacgacttc
accgggacgtttgaatttaagccgctcgagaagggctacggcgtcaccatcggcaatgcg
ctgcgtcgcattctgttgtcgtcgctggagggtttcgccatcacttcggtgcgcaccaac
agcgtgctgcacgagttttcgaccatcgaaggcgtgattgaggacatgtccgaaatcatc
ctgaacctgaagatggtccgcttcaagaaggtgagcgacgccatctcggataaaattacg
gtgcgcgtgaaaggccaggataccttctcgggtgctgatatcgccaagttcgccagcggt
ttcgaagtactgaatcccgaccacgtaattgctcaccttgaccccagcgtggagctggag
atggagctgacgattgcgcgcggccgtggctacgtgcccgccgacgagaacaagccggct
gaccaggttttcggtcagattgccatcgacgctatctacacgcccatcaagaacgtgaag
tacagcatcgagaacacccgtgtggagcagaagaccgactacgagaagctcgttatcgag
attcagaccgacggttcgattcacccggaggacgcgctgaaaggtgcggccaacatcctc
attcagcacttcatgctgttctcggacaacacgatgaccctcgaaggtccgcgtgtgacc
gaagacgagccgattgatgaagagaccatgcagatgcgcaagatgcttaagactccgctg
gaggacatggagctcagcgtacgcgctaaaaactgcctcaaggcggctgatattaagacg
atgggtgagttggtgcagctcgaaatcgccgacatgatgaagttccgcaacttcggtaag
aagagcctcaccgaacttgaaaacctcgtggaagagcgtggcctggagttcggcatggac
ctgagcaagtaccggctcgacgaagaatag
DBGET
integrated database retrieval system
