Hymenobacter monticola: MTP16_03165
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Entry
MTP16_03165 CDS
T08220
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
hmt
Hymenobacter monticola
Pathway
hmt02020
Two-component system
hmt02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
hmt00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MTP16_03165 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MTP16_03165 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hmt03021
]
MTP16_03165 (rpoN)
Transcription machinery [BR:
hmt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MTP16_03165 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_12
SF3b1
HTH_Crp_2
LacI
Motif
Other DBs
NCBI-ProteinID:
UOE34658
LinkDB
All DBs
Position
702247..703836
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AA seq
529 aa
AA seq
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MQRLDLKQLLSQKLSPQQIQFIKLLQIPTAELETRIKEEMEVNPALEEDESDDAEELDRD
DDDSDDSDDPDASLDNDENTLDEDFDDRSGNDSEMADEMPEPDLAAKEDLASTDDAPDNT
DLDLSDYLNDDEIAGYKMQGDGPGEEEERDTPLADTSASLIDSLMDQLHFADLDERQEAI
GQQLIGSIDGDGYIRRDLAAIANDLAFSQNLEVTVPEIEAVLRVVQQFDPPGIAARDLPE
CLLLQLERRPQDDNTVNAERILTETFEEFTKKHYPRIQQRLDLEDDELKEAINVILKLNP
KPGGSGPTGLGKTQYLMPDFILTNDNGVLNLTLNARNAPELRVSPAYTEMFRTYDKAAKK
DAKMKEAVTFVKQKLDSAKWFIDAIRQRQNTLLRTMNAIVELQREFFVEGDESKLKPMIL
KDIAQMIGMDISTVSRVANSKSVQTEFGIYPLKYFFSEGIATDSGEDASSREVKSILKDL
IGKESKERPLSDDKLEKMLNARGYNIARRTVAKYREQLNIPVARLRKEL
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgcctcgacctcaaacagctcctttcccaaaagctcagcccgcagcagattcag
ttcatcaagctgctgcaaatcccgacggcggagctggagacgcgcatcaaagaggagatg
gaggtgaacccggccctggaagaagacgaatctgacgacgccgaggagctggaccgcgac
gatgacgacagcgacgactcggacgaccccgacgccagcctcgacaacgacgagaacacg
ctggacgaggattttgacgaccgcagcggcaacgactcggaaatggccgacgaaatgccc
gagcccgacctggcggccaaggaagacctggcctcgaccgacgacgcgcccgacaacacc
gacctcgacctgagcgactacctcaacgacgacgaaatagcgggctacaagatgcagggc
gacggccccggcgaggaggaagaacgcgacaccccgctagccgacaccagcgcctcgctc
atcgactcgctaatggaccagctgcactttgccgacctcgacgagcggcaggaggccatt
ggccagcagctcattggctccattgacggcgacggttacatccggcgcgacctagcggcc
attgccaacgacctggcttttagccagaacctggaggtgaccgtgcccgagattgaggcc
gtgctgcgcgtggtgcagcagttcgacccgcccggcattgcggcgcgcgacctgcccgag
tgcctgctgctgcaactggagcgccgcccgcaggacgacaataccgtgaatgccgagcgt
attctcaccgaaacctttgaggagttcaccaagaagcactacccgcgcattcagcagcgg
ctcgatttggaagatgatgagctgaaagaagccatcaacgtcattctgaagctgaacccc
aagccgggcggcagcggccccacgggcctgggcaagacgcagtacctgatgccggacttc
atcctgacgaacgacaacggcgtgctgaacctgaccctgaacgcccgcaacgcccctgag
ctgcgcgtgagcccggcctacaccgagatgttccggacctacgacaaggccgccaagaag
gacgccaagatgaaggaggccgtgaccttcgtgaagcagaaactagactcggccaagtgg
tttatcgacgccatccggcagcggcaaaacacgctgctgcgcaccatgaacgccattgtg
gagctgcagcgggagttctttgtggaaggcgacgagagcaagctcaagccgatgattctg
aaagacattgcccagatgataggcatggacatctcgacggtgagccgggtggccaactcc
aagtcggtgcaaaccgagttcggcatctacccgctgaagtacttcttctccgaaggcatt
gccaccgactcgggcgaggacgccagcagccgcgaggtgaaaagcatcctcaaagacctc
atcggcaaggaaagcaaggaacggcctctcagcgacgataagctggaaaagatgctcaac
gcccgcggctacaacatcgcgcgccgcaccgtggccaagtaccgcgagcagctcaacatt
ccggtggcccggctgcgtaaggagctgtaa
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