Hymenobacter monticola: MTP16_08170
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Entry
MTP16_08170 CDS
T08220
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
hmt
Hymenobacter monticola
Pathway
hmt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hmt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MTP16_08170 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hmt03019
]
MTP16_08170 (recQ)
03400 DNA repair and recombination proteins [BR:
hmt03400
]
MTP16_08170 (recQ)
Enzymes [BR:
hmt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MTP16_08170 (recQ)
Messenger RNA biogenesis [BR:
hmt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MTP16_08170 (recQ)
DNA repair and recombination proteins [BR:
hmt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MTP16_08170 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RecQ-1-like_HTH
Helicase_C
HRDC
RQC
RecQ_Zn_bind
ResIII
HTH_40
Phage_TAC_9
Motif
Other DBs
NCBI-ProteinID:
UOE35612
LinkDB
All DBs
Position
complement(1945826..1948030)
Genome browser
AA seq
734 aa
AA seq
DB search
MSTAALQESPVLTTDLKHTLKKVFGYGQFRGTQEAVIQNILAGRNTFVIMPTGAGKSLCY
QLPALVLPGTAIVISPLIALMKNQVDQLGAFGVNAQVYNSTLTKTEMKRVQKDVMSGEVR
LLYVAPESLTKDDTIEFLLKSTISFVAIDEAHCISEWGHDFRPEYRKIRGIIDNLGGNVP
IIALTATATPKVQLDIQKNLHMDDASVFKTSFNRTNLYYEVRAKHNTKKQLIQYVKQHKG
KAGIIYCLSRKKVEEIAELLRVNDVRARPYHAGLDQQTRIDNQDAFLNEECDVIVATIAF
GMGIDKPDVRFVVHYDAPKSIEGYYQETGRGGRDGLEGDCLMFYSYDDILKLEKFSKDKP
VTERDNAHQLLQEMTNYAESSVCRRRQLLHYFGEVLEKDCGFCDNCKHPKERFEGEAAVG
LALRAVVQTEARFNLNHIGQVLLGLMNPHIESYGHNALPIYGTGKELGDAQFWHSVLRQC
LLNSFLEKDIDSLGLVRITDKGMDFIENPYSITLTRDHNFDEEQKADEEKEEVQHAAGHD
EALFTQLKELRKQVAKQKNLPPYVLFQDPSLKEMATTYPTTLHDLTHVSGVGQGKAQKFG
APFVAAIKKYVEDNDIETAEDVVVKSAVNRSKIKIYVIQQIDKKMMLEDIASSKGISMVE
LMEEIEHICYSGTRLNIDYYLEEMVEEEVRDEIYDYFMTASTDNIAVAMKELGDDFTEEE
LRLVRVKFLSEVAN
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacagctgccctccaggaatccccggtcctgacgaccgatttgaaacacacactg
aagaaagtatttggctacggccagtttcgagggacacaggaagctgttattcaaaacatt
ctggcggggcgcaacaccttcgtcatcatgcccaccggcgctggcaagagcctgtgctac
caactgccggcgctggtgttgccgggcacggccatcgtcatttcgccgctcatcgccctg
atgaaaaaccaggtcgaccagctcggcgcctttggggtaaatgcgcaagtgtacaattcg
accctgaccaaaaccgagatgaagcgggtgcaaaaggacgtgatgagcggcgaggtgcgc
ctgctctacgtggccccggaaagcctcaccaaagacgataccattgagtttctgctgaaa
agcaccatcagtttcgtggccatcgacgaggcccattgcatctcggagtggggccacgat
ttccggcctgagtaccgcaagattcgcggcatcatcgacaacctgggcggcaacgtgccc
atcatcgccctcacggccacggccacgcccaaagtgcagctggacatccagaaaaacttg
cacatggacgatgcctcggtgttcaaaaccagcttcaaccgcaccaacctctactacgag
gtgcgcgccaagcacaacaccaaaaagcagctgattcagtacgtgaagcagcacaagggc
aaggccggcatcatttactgcctgagccgcaagaaggtggaggaaattgccgagctgttg
cgcgtgaacgacgtgcgcgcccgcccctaccacgccggcctcgaccagcaaacccgcatc
gacaaccaggacgctttcctcaacgaggagtgtgacgtgattgtggccaccatcgccttc
ggcatgggcatcgacaagcccgatgtgcgcttcgtggtgcactatgatgcgccgaagtcc
atcgagggctactaccaggaaaccggccgcggcggccgcgacggcctggaaggcgactgc
ctgatgttctactcctacgacgacatcctgaagctggagaaattcagcaaggacaagccg
gtgaccgagcgcgacaacgcccaccagctgctgcaggaaatgaccaactacgccgagagc
tcagtgtgcaggcggcggcagctgctgcactatttcggcgaggtgctggagaaagactgc
ggcttctgcgacaactgcaagcaccccaaggagcggtttgagggcgaagcagccgtgggc
ttggcgttgcgcgccgtggtgcaaacggaggcccggttcaacctcaaccacatcggccag
gtgctgctggggctgatgaacccgcacattgagagctacgggcacaacgccctgccgatt
tacgggacgggcaaggagctgggcgacgcgcagttctggcattcggtgctgcgccagtgc
ctgctgaacagcttcctggagaaggacatcgacagcctgggcttggtgcgcatcaccgac
aagggcatggatttcatcgagaacccgtactccatcacgcttacccgcgaccacaacttc
gacgaggagcagaaggccgacgaggaaaaggaagaagtacagcacgccgccggccacgac
gaagccctgttcacgcagctgaaggagctgcgcaagcaggtagccaagcagaaaaacctg
ccgccctacgtgctgttccaggacccgagcctgaaggaaatggccaccacctaccccacc
accctgcacgacctcacgcacgtgtcgggcgtgggccagggcaaggcgcagaagtttggg
gcgccctttgtggccgccatcaagaagtatgtggaagacaacgacatcgaaaccgccgaa
gacgtggtggtgaagtcggccgtgaaccgttccaaaatcaaaatctacgtcatccagcag
attgacaagaaaatgatgctggaagacattgcttcctcgaaaggcatttcgatggtggag
ctgatggaggaaatcgagcacatctgctattccggcacccgcctcaacatcgactattac
ctggaggaaatggtggaagaagaagtgcgcgacgagatttacgactacttcatgacggcc
agcaccgacaacatcgccgtggcgatgaaggagttgggcgacgatttcacggaggaagag
ctgcgcctggtgcgcgtgaaattcctgagcgaagtagccaactaa
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