Hymenobacter monticola: MTP16_10260
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Entry
MTP16_10260 CDS
T08220
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
hmt
Hymenobacter monticola
Pathway
hmt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hmt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MTP16_10260 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hmt03019
]
MTP16_10260 (rny)
Messenger RNA biogenesis [BR:
hmt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MTP16_10260 (rny)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
NttC
KH-I_KHDC4-BBP
DUF4954
KH_2
Motif
Other DBs
NCBI-ProteinID:
UOE36004
LinkDB
All DBs
Position
complement(2451119..2452807)
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AA seq
562 aa
AA seq
DB search
MSPTILYCLLTAVVALVAGYLVGKQLAGKARLDHEGEAQARAQQILREAEEKGNRLRDEK
IKQADERLEQSKNKFKSLRNEFDQESKRLKAELDGELTQRRQGVTEQEQSIKLLTETTQR
QLEQLQKKEADLERQREKNQADTQQLRDKLEAQAEKRRLDHEETMAELEAKQREADEQLH
NVQRQLETIANLTAAEAREQLVESLKNEAQIQASSYVKDTVAQAKLTATKDAKKIVLETI
QRTASEHAIENCVSVFNIESDDVKGKIIGREGRNIRALEAATGVEIIVDDTPEAIIISGF
DPVRREIARLSLHLLVKDGRIHPARVEEIVAKTRKNIEEEIVEIGEKTIIDLGIHGLHPE
LIKMVGRMRFRSSYGQNLLQHSREVANLCATMAAEMGLDVKKAKRAGLLHDIGKVSTEEP
ELPHAILGMEMAKKWKEHPDVVNAIGAHHDEIEMTAMISPLVQACDAISGSRPGARREMM
ESYIKRLKQLEETANGFKGVNQCFAIQAGRELRVMVDAENVTDERANELSYEISQKIEKE
MQYPGQIKITVIREMRAVAYAK
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgtcacccaccatattatactgtttgctcactgcggtggtcgcccttgtggccggctac
ctggttggtaaacagctggccggcaaagcccggctcgaccacgaaggcgaggcccaggcc
cgcgcccagcaaattctccgcgaggccgaggagaaaggcaaccgccttcgcgacgagaaa
ataaagcaggccgacgagcgcctggagcagagcaagaacaagttcaagagcctgcgcaac
gagttcgaccaggaaagcaagcgcctcaaagccgagctggatggcgagcttacccagcgc
cgccagggcgtgaccgaacaggagcagagcatcaagctgctcaccgaaaccacccagcgc
caactcgaacaacttcagaaaaaggaggccgacctggagcgccagcgcgagaaaaaccag
gccgacacccagcagctgcgcgacaaactcgaggcccaggccgagaagcgccgcctcgac
cacgaggagaccatggccgagctggaagccaagcagcgcgaggccgacgagcagctgcac
aacgtgcagcgccagctcgaaaccatcgccaacctgaccgccgccgaagcccgcgagcag
ttggttgaaagcctcaagaacgaggctcagattcaggccagctcctacgtgaaggacacc
gtggcccaggccaagctcacggctaccaaggacgccaaaaagattgtgctggaaaccatt
cagcgcacggcttcggagcacgccatcgagaactgcgtgtcggtgttcaacattgaaagc
gacgacgtaaagggcaaaatcatcggccgcgagggccgcaacatccgcgcgctggaagcc
gccacgggcgtcgaaatcatcgtggatgacacccccgaggccatcatcatctcgggcttc
gacccggtgcgccgcgaaattgcccgcctctcgctgcacttgttggtgaaagacggccgc
attcaccccgcccgcgtggaagaaatcgtggccaaaacccgcaagaacatcgaggaagaa
atcgttgaaatcggtgagaaaaccatcatcgacctcggcattcacggcctgcaccccgag
ctgattaagatggtgggccgcatgcgcttccgctcttcctacggccagaacctgctgcaa
catagccgcgaagtggccaacctctgcgccaccatggcggccgagatgggcctcgacgtg
aagaaagccaagcgcgccggcctgctgcacgacatcggcaaggtgagcaccgaggagccc
gaactgccccacgccattctgggcatggagatggccaagaagtggaaagagcaccccgat
gtggtaaacgccatcggcgcccaccacgacgagattgagatgacggccatgatttcgccg
ctggtgcaggcctgcgacgccatttcgggctcgcgccccggcgcccggcgcgagatgatg
gaaagctacatcaagcgcctcaagcagctggaagaaaccgccaacggcttcaagggcgtg
aaccaatgcttcgccattcaagccggccgcgagctgcgcgtgatggtggacgccgagaac
gtgaccgacgagcgcgccaatgagctgagctacgaaatctcgcagaaaatcgagaaggaa
atgcagtaccccggccagattaaaatcaccgtgattcgggagatgcgcgccgtggcgtat
gcgaagtag
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