Hymenobacter monticola: MTP16_14320
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Entry
MTP16_14320 CDS
T08220
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
hmt
Hymenobacter monticola
Pathway
hmt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hmt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MTP16_14320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hmt03019
]
MTP16_14320
03400 DNA repair and recombination proteins [BR:
hmt03400
]
MTP16_14320
Enzymes [BR:
hmt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MTP16_14320
Messenger RNA biogenesis [BR:
hmt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MTP16_14320
DNA repair and recombination proteins [BR:
hmt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MTP16_14320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
UOE32307
LinkDB
All DBs
Position
complement(3439838..3441775)
Genome browser
AA seq
645 aa
AA seq
DB search
MSSSPTEFAPLALLKEHWGHTAFRPGQEDIINSVLSGHDTLALLPTGGGKSICFQVPALA
RPGICIVVSPLIALMKDQVDNLRRRGLKAEAIYAGMSHQEIDHALDNCVYGRHVKFLYVS
PERLLTDLFQARVAKMNVGLLAVDEAHCLSQWGYDFRPPYLRIAELREKLPAGTPVIALT
ATATAQVQADIVAKLQFRPGFGVFRQSFARPKLSYSVLQTEDKLRRLLEVVRGVGPGKTG
IVYARTRRQTEDTAAFLQQHRFPAAAYHAGLPSEKRTKVQQDWIQDKIRLIVATNAFGMG
IDKPDVRLVVHLDAPDTLEAYYQEAGRAGRDNLFAFAVLLAGPNDGDELRRRTNQSFPPL
DTVKRVYQALANYSQTAVGGGELAAFEFDMQQFAETYRLKAVDAHNSLKILQREGFVQLN
EAVNQPARVHLILSHQDLYAFQVANAQHDLLIKALLRLHGGELFSDFQTISENALATHLR
RSVVEVRQQLRYLHTAGILHYQPKQESPQALFTTPRYDAHKLPLDQVKMTAARDLARAKT
HAVAQYLSGTRCRQILLLTYFDEADPARCGICDICLAEKKAAQAAPAPSLREPVLAHLRQ
GPLAPRELLAAFAPKDATAVTATVRELVDRGELAYAADGRLVIGA
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcctcccctaccgaattcgcgccgctggctctgctgaaggagcactgggggcac
acggcatttcggccggggcaggaagacattatcaactccgtgctcagcgggcacgacacg
ctggcgctgctgcccaccggcggcggcaagagcatctgcttccaggtgccggcgctggcc
cggccgggcatttgcatcgtggtgtcgccgctcattgccctgatgaaggaccaggtagac
aacctgcgccgccgcgggctcaaggccgaggccatttacgccggcatgagccaccaagaa
atcgaccacgccctggacaactgcgtgtatgggcgccacgtgaaattcctgtacgtgagc
cccgagcgactgctgacggacctgtttcaagcccgggtggcgaagatgaacgtgggcctg
ctggccgtggacgaggcgcactgcctctcgcagtggggctacgatttccggccgccctac
ctgcgcattgccgagctacgcgagaagctgccggcgggcacgccggtcatcgccctcacg
gccacggccacggcgcaggtgcaggccgacattgtggccaagctgcagttccggccgggc
ttcggggtgtttcggcagagctttgcgcggcccaagctgtcgtactcggtgctccaaacc
gaagacaagctgcgccgcctgctggaagtggtgcgcggcgtggggccgggcaaaaccggc
atcgtgtacgcccgcacccgccggcagacggaggacacggccgcgtttctacagcagcac
cggtttccggcggcggcctatcacgccggtttgccttcggaaaagcgcaccaaggtgcag
caggactggattcaggacaaaattcgcctcatcgtggccaccaatgccttcggcatgggc
atcgacaagcccgacgtgcgcctcgtggtgcacctcgacgcgcccgacaccctggaagcc
tactaccaggaagccggccgggctgggcgcgacaacctctttgccttcgccgtgctgctg
gccggccccaacgacggcgacgagctgcgccgccgcaccaaccagtcgtttccgccgttg
gatacggtgaagcgcgtgtaccaggccttggccaactactcccagacggcggtgggcggc
ggcgagctggccgcctttgagttcgacatgcagcagtttgccgaaacctaccggctaaag
gccgtggacgcgcacaactcgctgaagattttgcagcgcgagggcttcgtgcagctcaac
gaggccgtgaaccagccggcgcgggtgcacctcatcctcagccaccaggatttgtacgcc
ttccaggtggccaacgcccagcacgacttgctgataaaggccctgctgcggctgcacggc
ggcgagctgttttcggacttccaaaccatttcggagaatgcgctggccacccacctgcgc
cgcagcgtggtggaggtgcgccagcaattgcgctacctgcacacggctggcattctgcac
taccagcccaagcaggagtcgccccaggccctattcaccacgccgcgctacgacgcccac
aagctgcccctcgaccaggtgaagatgacggccgcccgcgacctggcccgcgctaaaacc
cacgccgtggcccagtacctgagcggcacccgctgccgccagattctgctgctcacgtat
ttcgacgaggccgacccggcccggtgcggcatttgcgacatctgtctggcggagaaaaag
gcggcccaggcggctcctgcgccttctctgcgcgagcccgtgctggcgcacctgcgccag
gggccgctggcgccgcgtgagttactggccgctttcgcgcccaaagacgcgacagccgtg
acggccaccgtgcgcgagctggtggaccgcggcgagttggcctatgcggccgacgggcgg
ctggtgattggcgcttag
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