Hymenobacter monticola: MTP16_15280
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Entry
MTP16_15280 CDS
T08220
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
hmt
Hymenobacter monticola
Brite
KEGG Orthology (KO) [BR:
hmt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hmt03009
]
MTP16_15280 (rlmD)
Enzymes [BR:
hmt01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
MTP16_15280 (rlmD)
Ribosome biogenesis [BR:
hmt03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
MTP16_15280 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_15
Methyltransf_25
MTS
N6_N4_Mtase
PrmA
PCMT
Cons_hypoth95
DUF4265
Methyltransf_11
Motif
Other DBs
NCBI-ProteinID:
UOE32492
LinkDB
All DBs
Position
complement(3705516..3706928)
Genome browser
AA seq
470 aa
AA seq
DB search
MSRMKNIPAELLRNVTIQDMVAEGKCLVRIENLVIFVSQVAPGDVVDLRVTKAKKNFLEA
VPTHFHAYSELRTTPFCQHFGTCGGCKWQHLGYDSQLRFKQQQVEDTLQRIGKVALPEIQ
QILPSPQRTYYRNKLEYTFSFMGWLTNEQINDDTQHYDRRVLGFHTPARFDKIIDVQHCH
LQPEPSNEIRLFIRDYARERDLRFGNIVRQTGNLRNLIIRTAQTTGEIMVILQCYLPHHS
IEPLLDAVYEKFPQITSLNYVLNNKGNETFHDLEVVNYKGKPYIEEEMEGLRFRIGPKSF
YQTNSEGAHQLYKVAREFADLKGDELVYDLYTGAGTIASFVARQARKVIGVEYVEQAVAD
AHVNAEINNITNMEFFAGDMKDVLTAEFTAHHGRPDVLITDPPRAGMHEDVVKRLLELRA
PRIVYISCNPATQARDLELLDAAYKVTRVQPVDMFPHTHHVENVVALELK
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgagccgaatgaaaaacattcccgcggagctgctccgcaacgtcaccatccaggacatg
gtggccgaaggcaagtgcctggtgcgcatcgaaaatctggtcatcttcgtgtcgcaggtc
gcccccggcgacgtggtcgatttgcgcgtcaccaaagccaagaagaatttcctggaagcc
gtgcccacgcacttccacgcctactccgagctgcgcaccacgccgttttgccagcacttc
ggcacctgcgggggctgcaagtggcagcacctgggctacgactcgcagctgcgcttcaag
cagcagcaggtggaagacaccttgcagcgcatcggcaaagtggcgctgcccgaaatccag
cagattctgccctcgccccagcgcacctactaccgcaacaagctggagtacaccttcagc
ttcatgggctggctgacgaacgagcaaatcaacgacgatacccagcactacgaccgccgg
gtgctgggcttccacaccccggcccgcttcgacaagataatcgacgtgcagcactgccac
ctgcagcccgagccgagcaacgaaatccgcctcttcatccgcgactacgcgcgggagcgg
gacctgcgtttcggcaacatcgtgcgccagaccggcaacctgcgcaacctcatcatccgc
acggcccagaccaccggcgaaatcatggtgattttgcagtgctacctgccccaccacagc
atcgagccgctgctggatgccgtgtacgagaaattcccgcagattacctcgctcaactac
gtcctcaacaacaagggcaacgaaaccttccacgacctggaggtggtgaactacaagggc
aagccctacatcgaggaggaaatggaaggcctgcgcttccgcatcggccccaagtccttc
taccaaaccaactccgaaggcgcccaccagctctacaaagtggcccgcgagtttgccgac
ctcaagggcgacgagctggtgtacgacctctacaccggcgccggcaccatcgccagcttc
gtggcccggcaggcccgcaaggtcatcggcgtcgagtacgtggagcaggccgtggccgac
gcccacgtgaacgccgaaatcaacaacatcaccaacatggagttctttgcgggcgacatg
aaggacgtgctcacggccgagttcaccgcccaccacggccgccccgacgtcctcattacc
gacccgccacgcgccggcatgcacgaagacgtggtgaagcgcctgctggagctgcgcgcc
ccccgcatcgtgtacatcagctgcaaccccgccacccaagcccgcgacctggagctgctg
gatgccgcctacaaagtgacccgcgtgcagccggtggacatgttcccgcacacccaccac
gtggagaatgtggtggcgctggagttgaagtag
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