Hymenobacter monticola: MTP16_16125
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Entry
MTP16_16125 CDS
T08220
Name
(GenBank) AAA domain-containing protein
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
hmt
Hymenobacter monticola
Brite
KEGG Orthology (KO) [BR:
hmt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hmt03009
]
MTP16_16125
03012 Translation factors [BR:
hmt03012
]
MTP16_16125
Enzymes [BR:
hmt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
MTP16_16125
5.6.2.5 RNA 5'-3' helicase
MTP16_16125
Ribosome biogenesis [BR:
hmt03009
]
Eukaryotic type
Other ribosome biogenesis factors
MTP16_16125
Translation factors [BR:
hmt03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
MTP16_16125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
AAA_30
AAA_19
Viral_helicase1
DEAD
UvrD-helicase
Helicase_RecD
SMUBP-2_HCS1_1B
SLFN-g3_helicase
ResIII
AAA_16
nSTAND3
AAA_22
PhoH
UvrD_C_2
HEM4
Flavi_DEAD
AAA_25
T2SSE
Radial_spoke_3
AAA_5
DAP3
TsaE
AAA
NPHP3_N
Fasciclin
AAA_24
ATPase
ORC-CDC6-like
RuvB_N
IstB_IS21
cobW
Zot
Motif
Other DBs
NCBI-ProteinID:
UOE32653
LinkDB
All DBs
Position
complement(3903565..3905556)
Genome browser
AA seq
663 aa
AA seq
DB search
MSDTTPTFAPVDPYAIEKELRQVQALMKLEQQEDLEQFKLKNAKASIQERQQRGLTWYPV
TISQEEIGFGGKVVLELERPAGQQGLHLFQVGKNASLFGNVPGRSATDRPTLSGVITSVR
RNKLLLATTKEDLPDWVTEGHKMGIDLTFDEVSYREMDYALGKVMGAYGDRLAELRDILL
GTKEARFREEKPADLFYPSPLNESQLAAVRHVMAAKDVAIIHGPPGTGKTTTLVQAILET
IRRERRVLVCAPSNTAVDLLTEKLAERGVNVIRMGNPSRVSDLLLEHTLDAQVMNHKSYN
EMRSMRQTADQYRETASKYVRNFGYEEQQHRRQLKEEARMLFQQADDLERYITEDLLESV
QVITCTLVGASNRNIRHLTYETVFIDEAAQALEPGCWIPISKGNRVILAGDHHQLPPTVK
SEKAGALRETLFEKAIKRQPTTARMLTVQYRMHEQIMQFSSDQFYDGRLEAYETVAHAGL
DAYDLRFAPDLPVEFLDTAGFGFQEITIPESRSTANPEEADLLLKRLAQLLEPYDPADHE
DDPLSIGVIAPYRAQINYLKDAIEENDELSGFMLHRQLSVGTVDSFQGQERDIIAITLTR
SNNHGEIGFLSDIRRMNVGMTRARKKLLLVGDSSTLSAHPFFKALIEYVEQVGGYRTAWE
LQD
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
ttgtccgataccacccccactttcgcccccgtcgacccctacgccattgaaaaagagctg
cgccaggtgcaggctctcatgaagctggagcagcaggaagacctggagcaattcaagctc
aaaaacgccaaggccagcatccaggagcggcagcagcgcggcctcacctggtaccccgtc
accatctcgcaggaagaaattggcttcggcggcaaggtggtgctggagctggagcggccc
gccggccagcagggcctgcacttgtttcaggtgggcaaaaacgcctccctgtttggcaac
gtgcccggccgctcggccaccgaccgccccaccctcagcggggtaattaccagcgtgcgg
cgcaacaagctgctgcttgccaccaccaaggaagacctgcccgactgggtgaccgaaggc
cacaaaatgggcatcgacctcaccttcgacgaggtgagctaccgcgagatggactacgcg
ctgggcaaggtgatgggcgcttacggcgaccgcctggccgagctgcgcgacatcctgctg
ggtaccaaggaagcccgcttccgcgaggagaaaccagccgacctcttctaccccagcccg
ctcaacgagtctcagctggcagccgtgcgccacgtgatggccgccaaggacgtagccatc
atccacggtccgcccggcaccggcaaaaccaccacgctggtgcaggccatcctggagacc
atccggcgcgagcggcgggtgctggtgtgcgcgcccagcaacacggccgtcgatttgctc
actgaaaagctggccgagcgcggcgtcaacgtcatccgcatgggcaacccctcacgggtg
tcggacctgctgctggagcacaccctcgacgcccaggtgatgaaccacaagagctacaac
gagatgcgctcgatgcgccagacggccgaccagtaccgcgaaacagccagcaagtacgtg
cgcaacttcggctacgaggagcagcagcaccgccggcagctcaaggaagaggcgcgcatg
ctgttccagcaagccgacgatttggagcgctacatcaccgaggacttgctggaatcggtg
caggtgataacgtgcacgctggtgggcgccagcaaccgcaacatccgccacctcacctac
gaaacggtgttcatcgacgaggccgcccaggctctggagccgggctgctggattccgatt
tccaagggcaaccgcgtgattctggccggcgaccaccaccagctgccgcccaccgtgaag
agcgaaaaagccggcgccctgcgcgaaacgctgttcgagaaagccattaagcgccagccc
accacggcccgcatgctcacggtgcagtaccgcatgcacgagcaaatcatgcagttcagc
tccgaccagttctacgacggccgcctcgaagcctacgaaaccgtggcccacgccggcctc
gacgcctacgacctgcgctttgcccccgacctgcccgtggaattcctcgacacggccggc
tttggcttccaggaaatcaccattcccgaaagccgctccaccgccaaccccgaagaagcc
gacctgctcctcaagcgcctcgcccaactcctggaaccctacgaccctgccgaccacgaa
gacgacccgctcagcatcggcgttattgccccctaccgcgcccaaatcaactacctgaag
gacgccatcgaggaaaacgacgagctcagcggcttcatgctgcaccgccagctcagcgtg
ggcaccgtggactccttccagggccaggagcgcgacattattgccatcaccctcacccgc
agcaacaaccacggcgaaatcggcttcctgagcgacatccgccgcatgaacgtgggcatg
acccgggcccgcaagaagctgctgctcgtcggcgactcttcgacactgagcgcccacccg
ttcttcaaagcgctgattgagtacgtggagcaagtcggcgggtaccgcacggcttgggag
ctgcaggattag
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