Hymenobacter monticola: MTP16_23130
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Entry
MTP16_23130 CDS
T08220
Name
(GenBank) HRDC domain-containing protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
hmt
Hymenobacter monticola
Brite
KEGG Orthology (KO) [BR:
hmt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hmt03016
]
MTP16_23130
Enzymes [BR:
hmt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
MTP16_23130
Transfer RNA biogenesis [BR:
hmt03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
MTP16_23130
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
UOE33995
LinkDB
All DBs
Position
5534263..5535435
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AA seq
390 aa
AA seq
DB search
MPTIHYLTTADAVATAAAHFATLPRIGIDLEFDDMRHRYGRHLALIQVFDGREVYLIDPL
PLTDMAAGLEPLFAVLRSPAVAKVFHSCKSDILLLDELFGVHCRNIVDTSVQFTLLAAED
NNISLGRLIQAELGFEVDKGEQKSNWLKRPLTEAQKEYAANDVLYLFELTDRLSARLEEL
GRADWAAQENLALEAVRYGRDDPRPWSRNAAKYKISPQEMPIFRELYLLRDAVARQLDRP
PYHVLSNDKLAELTRNPIETSLQLRTANGLHPELKRAPYAEQLLAIGTTDLAPDAPLPAD
QRKFPFRRRLSGPAATRAEARETLLNALKGHLAADHGSTMANMVLSNRLIADIIELGADT
ALRPWQQQLLRESAERHGESYEQIAAPFQS
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgcccaccattcattacctgaccactgccgacgccgttgccactgcggccgcgcatttt
gccaccctgccacgcatcggcatcgacctggagtttgacgacatgcgccaccgctacggg
cggcacctggcgctcattcaggtgtttgacgggcgcgaggtgtacctcatcgacccgctg
ccgcttaccgacatggccgccgggctggagccgctctttgccgtgctgcgcagcccggcc
gtggccaaggtgttccactcctgcaagtccgacattttgctgctcgacgagttgttcggc
gtgcactgccgcaacatcgtggacaccagcgtgcagttcaccctgctcgcggccgaggac
aacaacatttcgctgggccgcctcattcaggccgagctgggctttgaggtagacaagggc
gagcagaagtcgaactggctgaagcgcccgctcaccgaggcccagaaggagtacgccgcc
aacgacgtgctgtacctgtttgaactcaccgaccgcctaagcgcgcgcttggaggagctg
ggccgcgccgactgggccgcccaggaaaacctggccctcgaggccgtgcgctacggccgc
gacgacccgcgcccgtggtcacgcaatgcggccaaatacaaaatatcgccgcaggaaatg
cccattttccgggagctgtacttgctgcgcgacgccgtggcccggcagctcgaccgcccg
ccctaccacgtgctcagcaacgacaagctggccgagctcacgcgcaaccccatcgaaact
tccctgcagctgcgcaccgccaacggcctgcaccccgagctgaaacgcgcgccctacgcc
gagcagttgctggccatcggcaccaccgacctggcccccgatgccccgctgccggccgac
cagcgcaagtttccgttccggcggcgcctgagcggccccgccgccacccgcgccgaagcc
cgcgaaaccctgctcaacgccctgaaaggccacctcgccgccgaccacggcagcaccatg
gccaacatggtgctcagcaaccgccttattgccgacatcattgagctaggcgccgacacc
gccttgcggccctggcagcagcagctgctgcgcgagtcggccgagcgccacggcgaaagc
tatgagcagattgccgcaccgtttcagtcttaa
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