Halomicrobium mukohataei: Hmuk_0565
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Entry
Hmuk_0565 CDS
T00982
Name
(GenBank) nucleic acid binding OB-fold tRNA/helicase-type
KO
K07466
replication factor A1
Organism
hmu
Halomicrobium mukohataei
Pathway
hmu03030
DNA replication
hmu03420
Nucleotide excision repair
hmu03430
Mismatch repair
hmu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hmu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Hmuk_0565
03420 Nucleotide excision repair
Hmuk_0565
03430 Mismatch repair
Hmuk_0565
03440 Homologous recombination
Hmuk_0565
03460 Fanconi anemia pathway
Hmuk_0565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hmu03000
]
Hmuk_0565
03032 DNA replication proteins [BR:
hmu03032
]
Hmuk_0565
03400 DNA repair and recombination proteins [BR:
hmu03400
]
Hmuk_0565
Transcription factors [BR:
hmu03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
Hmuk_0565
DNA replication proteins [BR:
hmu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
Hmuk_0565
DNA repair and recombination proteins [BR:
hmu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
Hmuk_0565
MMR (mismatch excision repair)
Hmuk_0565
DSBR (double strand breaks repair)
HR (homologous recombination)
Hmuk_0565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_anti-codon
REPA_OB_2
Ssb-like_OB
SHLD2_OB1
Motif
Other DBs
NCBI-ProteinID:
ACV46699
UniProt:
C7NYN8
LinkDB
All DBs
Position
complement(534388..535836)
Genome browser
AA seq
482 aa
AA seq
DB search
MGAIGDIYADLETDEVSEEEFREAVEEKVEQMGGLADEETAAMLLAHELNENEVNTVADI
EPGMNEVKFIAKVMSVGDLRTFERDGDGEDEPDEGRVINVEAADETGSVRLAFWDQEAES
IAEGQLDVGDVLRVAGRPQEGYNGLEVSVDKAEPDADATVDVEPGGGSTIDALSMGQSDV
DVRGVVLDTDSIRTFDRDDGSEGRVANLTIGDETGRVRVTLWDDRADRAEEIDPGTAVEI
VDGYVREREGSLELHVGDHGAVDEIDEEVAFEPDAAAIERVEIGETVDIAGVVRSADPKR
TFDRDDGSEGQVRNVRIQDATGDIRVALWGDKADKEIAPGDEILAADVEIDDGWQDDKEA
SAGWQSTVVVLDGAASAPESGGGDQQTASADGGNESAGLDAFADDGADEHTDDASETAGD
ADATTGETIEFTGTVVQTGDPVVLDDGEETMSVETDERVQLGQEVTARGTLRDDRLDADD
VF
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcgataggagacatctacgcggacctcgagacggacgaggtctccgaggaggag
ttccgcgaggccgtcgaggagaaggtcgagcagatgggcgggctcgcagacgaggagacc
gccgcgatgttgctcgcacacgaactcaacgagaacgaggtcaacacggtcgccgacatc
gagccggggatgaacgaggtgaagttcatcgcgaaggtgatgtcggtcggcgatctgcgc
accttcgagcgagacggcgacggtgaggacgaacccgacgagggccgcgtgatcaacgtc
gaggcggccgacgagacgggatcggttcgactggcgttctgggaccaggaagccgagtcc
atcgcagagggacaactcgacgtgggcgacgtgttacgcgtcgccggccggccacaggag
gggtacaacgggctggaagtctccgtcgacaaggccgaacccgacgcggacgcgaccgtc
gacgtcgagccgggcgggggatcgaccatcgacgccctgagcatgggccagtccgacgtc
gacgtgcgcggcgtggtcctcgacaccgactcgattcgaaccttcgaccgcgacgacggc
agcgaagggcgggtcgcgaacctgacgatcggcgacgagaccgggcgagtccgggtgacg
ctgtgggacgaccgggccgaccgcgcagaggagatcgaccccgggacggccgtcgagatc
gtcgacggctacgtccgcgagcgcgaggggagtctcgaactccacgtcggcgaccacggt
gccgtcgacgagatcgacgaggaggtcgccttcgagcccgacgccgccgcgatcgagcgc
gtcgagatcggcgagactgtcgacattgccggggtcgttcgctcggccgatccgaagcga
accttcgaccgcgacgacggcagcgagggccaggttcgtaacgtccggattcaggacgcg
accggcgacatccgcgtcgcgctctggggcgacaaggcggacaaggagatcgcacccggc
gacgagatcctcgccgccgacgtggagatcgacgacgggtggcaagacgacaaggaagcc
tctgcgggctggcagtcgacagtggtcgtcctcgacggtgccgccagtgctccggagagt
ggcggtggtgaccagcagaccgcaagcgccgacggcgggaacgagtccgccgggctggac
gccttcgccgacgacggggccgacgagcacaccgacgacgcgagcgagactgccggcgac
gcagacgcgaccaccggcgagacgatcgagttcaccgggacggtcgtccagaccggcgac
ccggtcgtactcgacgacggcgaagagacgatgagcgtcgagacggacgaacgcgtccag
ctcggtcaggaggtcacggctcgcgggaccctccgagacgaccgactcgacgccgacgac
gtgttctga
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