Halomicrobium mukohataei: Hmuk_0666
Help
Entry
Hmuk_0666 CDS
T00982
Name
(GenBank) tRNA intron endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
hmu
Halomicrobium mukohataei
Brite
KEGG Orthology (KO) [BR:
hmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hmu03016
]
Hmuk_0666
Enzymes [BR:
hmu01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
Hmuk_0666
Transfer RNA biogenesis [BR:
hmu03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
Hmuk_0666
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo_N
tRNA_int_endo
Motif
Other DBs
NCBI-ProteinID:
ACV46798
UniProt:
C7NZB2
LinkDB
All DBs
Position
complement(628000..629010)
Genome browser
AA seq
336 aa
AA seq
DB search
MDATLSDGVVRAGKQAREQFYDSSGYGRPVDAGKLELAPVEAAHLLYRGDLDGVDGMGLR
ELLNSALLSEVDFFVYKDLRDRGFYCSPARSERVADPDGCDFVVYPRGKGPWDDAVAHRI
RVVSERETVPAADLGACALAVVDEESEISYFETHRPDVTGTSRSSVPETDGDLLADRVVC
WDPPAELYEAAFYGQPLDEQDAQAIQLSLVEAAYLAGTGTLHVEGDADAVIERGRAVEGD
RFDRRLAVYERLREQGVAPKTGFKFGADFRTYADVESVADLGHSELLVRAFDAGHVFEPR
DLALDVRLAHGVRKTMAYAFVGDEGIDWLAVERLTP
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggatgcgacgctctccgatggggtcgtccgggccggcaagcaggcccgcgagcagttc
tacgactccagcgggtacggtcggccggtcgacgccgggaagctcgaactggcacccgtc
gaggcggcacacctgctgtatcgcggtgacctcgacggtgtcgacgggatgggacttcgg
gagctactgaactccgcgttgctgtcggaggtcgacttcttcgtctacaaggacctgcgc
gaccgggggttctactgctcgccggcccgctcggagcgcgtcgcggaccccgacggctgt
gacttcgtcgtctatccacggggcaaggggccgtgggacgacgccgtcgcccaccggatc
cgggtcgtcagcgagcgcgagacggtcccggcagccgatctgggggcgtgtgcgctggcc
gtcgtcgacgaggagagcgagatcagctacttcgagacccaccgtccggacgtgaccggg
acgagtcggtcgtccgtccccgaaaccgacggcgatctgctcgcagacagggtcgtctgc
tgggacccgcccgccgaactgtacgaagcggccttctacgggcaaccgctcgacgagcag
gacgcacaggcgatccagctctcgctggtcgaggccgcgtacctcgccgggacgggcacc
ctccacgtcgagggcgatgccgacgcggtgatcgaacgcggtcgcgccgtcgagggcgat
cggttcgaccgccggctcgcggtgtacgaacggcttcgagagcagggtgtcgcgcccaaa
acgggcttcaagttcggcgctgacttccggacctacgcggacgtcgagagcgtcgcggac
ctgggccactccgaactgctcgtgcgggcgttcgacgccggccacgtcttcgagccccga
gatctcgcactggacgtgcgcctagcccacggcgtgcgcaagacgatggcctacgcgttc
gtcggcgacgaggggatcgactggctggccgtcgagcggctgacgccctga
DBGET
integrated database retrieval system
