Halomicrobium mukohataei: Hmuk_1059
Help
Entry
Hmuk_1059 CDS
T00982
Name
(GenBank) phosphoesterase RecJ domain protein
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
hmu
Halomicrobium mukohataei
Pathway
hmu03410
Base excision repair
hmu03430
Mismatch repair
hmu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hmu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Hmuk_1059
03430 Mismatch repair
Hmuk_1059
03440 Homologous recombination
Hmuk_1059
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hmu03400
]
Hmuk_1059
DNA repair and recombination proteins [BR:
hmu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Hmuk_1059
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Hmuk_1059
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Hmuk_1059
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH_CID
DHHA1
DHH
Motif
Other DBs
NCBI-ProteinID:
ACV47186
UniProt:
C7P1H8
LinkDB
All DBs
Position
1009041..1010519
Genome browser
AA seq
492 aa
AA seq
DB search
MGPVPDLDDVATACAQRLCRADRVLLASHIDADGLTSAAVASLALERAGIPFEVVFKKQL
DETEIASIAAREYDTVLFTDFGSGQLDVISEHERAGDFEPVIADHHQPAVVDGQRPSASG
TDSHPAETEFHLNPLLVGLDGASELSGAGASYVLARALAEVGETEPPDGNRDLAGLAVVG
AVGDMQAVDGELVGANTGIVEEGVAAGVLEEGTDLTLYGKQTRPLPKLLEYATEVPIPGI
SNDEAGAIRFLESLGLDLKRSGEWRTWADLTDDERQTVASALVQRAVERGVPADDIQTLI
GTTYTLTEEPTGTELRDASEFSTLLNATARYERADVGLAVCRGDREAALDRAQTLLSNHR
RNLSEGLTLIQERGVTHEDNVQWFDAGSAIRETIVGIVAGMALGTAGVDADKPILAFASK
DDDETKVSSRGTGPLVGRGLDLSAVMREAARSVGGDGGGHDIAAGATVPAGEEQAFVDAA
DEIVADQLGNKS
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgggaccagtccccgacctcgacgacgttgcgaccgcgtgtgcccagcggctctgtcgc
gcggatcgcgtactgttggcgtcacacatcgacgccgacggcctgaccagtgccgccgtc
gcctcgctggcactggagcgggccggaatccccttcgaggtcgtgttcaagaagcaactc
gacgagacagagatcgcctcgatcgccgcccgcgaatacgacaccgtcctctttaccgac
ttcggcagcgggcaactcgacgtgatcagcgagcacgagcgagcgggcgacttcgagccc
gtgatcgccgaccaccaccagccggccgtcgtcgacgggcagcgcccgtctgccagtggg
acggactctcaccctgccgagacggagtttcacctgaacccgctgctcgtcggcctcgac
ggggcctcggagctgtcgggtgcgggcgcgagctacgtcctcgcgcgggcgctggccgag
gtcggcgagaccgagccacccgacgggaaccgggacctggccggtctggccgtcgtcggc
gctgtcggtgacatgcaggccgtcgacggcgaactcgtcggcgcgaacaccggcatcgtc
gaggagggcgtcgcggccggcgtcctcgaagaggggaccgacctgacgctgtacggcaag
cagacccggccgctgccgaagctactggagtacgccacggaggtcccgatccccggcatc
tccaacgacgaggccggcgcgatccggtttctcgaatcgctcgggctcgacctgaagcgg
tccggcgagtggcgcacgtgggcggacctgaccgacgacgaacgccagaccgtcgccagc
gcgctggtccagcgggccgtcgagcgcggcgtgcccgccgacgacatccagacgctgatc
ggcacgacgtacacgctgaccgaggagccgacggggacggagctgcgcgacgccagcgag
ttctcgacgctgttgaacgcgaccgcccgctacgagcgtgccgacgtgggccttgcggtg
tgtcgcggcgaccgcgaggccgcgctcgaccgcgcccagacgctgctctcgaaccaccgt
cggaacctctcggagggactgacgctgatccaggagcggggcgtgacccacgaggacaac
gtccagtggttcgacgccggctcggcgatccgcgagacgatcgtcggcatcgtcgccggc
atggcgctggggacggccggcgtggacgccgacaagccgatcctcgcgttcgccagcaag
gacgacgacgagacgaaagtctcctcgcgcgggaccggcccgctcgtgggacggggcctg
gacctctcggcggtgatgcgcgaggcggcccgttcggtcggcggcgacggcggcggccac
gacatcgcggccggcgcgaccgttccggcgggcgaagagcaggccttcgtcgacgccgcc
gacgagatcgtggccgaccagctcggcaacaagagctaa
DBGET
integrated database retrieval system
