Halomicrobium mukohataei: Hmuk_1153
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Entry
Hmuk_1153 CDS
T00982
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
hmu
Halomicrobium mukohataei
Pathway
hmu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hmu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Hmuk_1153
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hmu03400
]
Hmuk_1153
DNA repair and recombination proteins [BR:
hmu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Hmuk_1153
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Hmuk_1153
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
UB2H
AAA_22
AAA_30
DUF87
DUF8048
Motif
Other DBs
NCBI-ProteinID:
ACV47279
UniProt:
C7P250
LinkDB
All DBs
Position
1097740..1099794
Genome browser
AA seq
684 aa
AA seq
DB search
MSDSGPLSPDRPDAETAFRVDAPFEPAGDQPDAIEQLVDGYRRGMDKQTLLGVTGSGKTN
TVSWAIEELQQPTLVIAHNKTLAAQLYEEFRSLFPDNAVEYFVSYYDYYQPEAYVEQTDT
YIDKDASINDEIDRLRHSATRSLLTRDDVIVVASVSAIYGLGDPRNYVDMSLRLEEGQQI
ERDELLGQLVDLNYERNDVDFTQGTFRVRGDTVEIYPMYGRYAVRVDMWGDEIDRLVKMD
PLEGEVVSQEPAVLLHPAEHYSIPEQRLQRAIEEIEDMLADRIRYFERQGDAVAAQRIEE
RTTFDLEMMKETGYCSGIENYSVHLSDRESGEAPYTLLDYFPEDFLTVVDESHQTIPQIK
GQFEGDKSRKESLVENGFRLPTAFDNRPLTFEEFEEKTDRTLYVSATPGDYEREESGQVV
EQIVRPTHLVDPAIEVADASGQVQDLLERIESMPDEERVLVTTLTKRMAEDLTEYLEESG
VDVAYMHDETDTLERHELIRSLRLGEIQVLVGINLLREGLDIPEVSLVAILDADQEGFLR
SETTLVQTMGRAARNVNGEVVLYADDTSDAMRSAIEETQRRRQIQQAYNEEHGFEPTTIE
KEIGESSLPGAETDTSDVAGDGPADADEAARQIDRLEARMAEAADNLEFELAADIRDRIR
ELREEFELDGGDDGGVPAPGPGEF
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgagcgactccggcccactgtctccggaccgaccggacgccgagacggcgtttcgcgtc
gatgcaccgttcgagccagccggcgaccagccagacgccatcgagcagctcgtcgacgga
tatcgacggggaatggacaaacagaccctgctgggcgtcactgggtcgggcaagaccaac
accgtctcgtgggcgatcgaagagctccagcagccgacgctggtcatcgcccacaacaag
acgctggcggcccagctctacgaggagtttcggagtctcttccccgacaacgccgtcgag
tacttcgtctcgtactacgactactaccagcccgaggcctacgtcgagcagaccgacacc
tatatcgacaaggacgcctcgatcaacgacgagatcgaccgcctcaggcactctgcaact
cgctcgctgctgacccgtgacgacgtgatcgtcgtcgcttcggtgtcggcgatctacggg
ctgggtgacccgcgcaactacgtcgacatgagcctccggctggaggagggccagcagatc
gagcgcgacgaactcctgggccagctcgtcgacctgaactacgagcgcaacgacgtggac
ttcacccaggggaccttccgcgtgcggggcgacaccgtcgagatctacccgatgtacggc
cgctacgccgtccgggtggacatgtggggagacgagatcgaccggctcgtgaagatggac
ccgctggagggcgaggtcgtcagccaggagcccgccgtcttgctccacccggcagagcac
tactcgatccccgaacagcgcctccagcgggcgatcgaggagatcgaggacatgctggca
gatcgcatccgctacttcgaacgacagggcgatgccgtcgcggcccagcgcatcgaggag
cgaaccacgttcgacctggagatgatgaaagagaccggctactgctcggggatcgagaac
tactcggtccacctctcggaccgtgagagcggcgaagcgccctacaccttgctggactac
ttccccgaggacttcctcaccgtcgtcgacgagtcccaccagacgatcccccagatcaaa
ggccagttcgagggcgacaagtcgcgcaaggagagtctggtggagaacggctttcgcctg
ccgaccgccttcgacaaccgcccgttgaccttcgaggagttcgaggaaaagaccgaccgg
acgctgtacgtctcggcgacgccgggcgactacgagcgcgaggagagcgggcaggtcgtc
gaacagatcgtccgtccgacccacctcgtcgatcccgcgatcgaggtcgcagacgccagc
ggccaggtccaggacctgctcgaacggatcgaatcgatgcccgacgaggagcgcgtgctg
gtgacgacgctcaccaaacgcatggccgaggatctcaccgagtatctcgaagagagcggc
gtcgacgtggcctacatgcacgacgagaccgacacgctggaacgccacgaactgatccgg
tcgctgcggctgggcgagatccaggtgctcgtcggcatcaacctcctgcgggagggactg
gacatccccgaagtgagcctcgtcgcgattctcgacgccgaccaggaggggttcctgcgg
tcggagacgacgctcgtccagacgatggggcgggccgcccgcaacgtcaacggcgaggtc
gtactctacgccgacgacacgagcgacgcgatgcggtcggccatcgaggagacccagcgc
cgccgccagatccagcaggcgtacaacgaggaacacggcttcgagccgaccaccatcgag
aaggagatcggcgagtcctcgcttccgggtgccgagacggacaccagcgacgtggccggt
gacggtccggccgacgccgacgaggccgcccgacagatcgaccggctcgaagcccggatg
gccgaggcggccgacaacctggagttcgaactcgctgcggacatccgcgatcggatccgc
gagctacgcgaggagttcgaactcgacggtggcgacgacggtggcgtgccggcccccggc
ccgggtgagttctga
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