KEGG   Halomicrobium mukohataei: Hmuk_1780
Entry
Hmuk_1780         CDS       T00982                                 
Name
(GenBank) AAA family ATPase, CDC48 subfamily
  KO
K13525  transitional endoplasmic reticulum ATPase
Organism
hmu  Halomicrobium mukohataei
Pathway
hmu04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:hmu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    Hmuk_1780
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hmu03019]
    Hmuk_1780
   03009 Ribosome biogenesis [BR:hmu03009]
    Hmuk_1780
   04131 Membrane trafficking [BR:hmu04131]
    Hmuk_1780
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:hmu04147]
    Hmuk_1780
Messenger RNA biogenesis [BR:hmu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     Hmuk_1780
Ribosome biogenesis [BR:hmu03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    Hmuk_1780
Membrane trafficking [BR:hmu04131]
 SNARE
  SNARE associated proteins
   Others
    Hmuk_1780
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    Hmuk_1780
Exosome [BR:hmu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   Hmuk_1780
SSDB
Motif
Pfam: AAA CDC48_N AAA_lid_3 CDC48_2 AAA_16 RuvB_N AAA_5 AAA_22 TIP49 AAA_2 AAA_33 AAA_14 NPHP3_N nSTAND3 RNA_helicase AAA_28 IstB_IS21 Mg_chelatase AAA_7 AAA_18 AAA_3 ABC_tran ATPase DUF815 AAA_17 Sigma54_activat NB-ARC Parvo_NS1 AAA_30 AAA_24 TsaE AAA_11 SLFN-g3_helicase NACHT PhoH IPT Vps4_C
Other DBs
NCBI-ProteinID: ACV47894
UniProt: C7P472
LinkDB
Position
complement(1700923..1703145)
AA seq 740 aa
MNEVQLEVAKAYPNDSGRGIARLDPDTLLHLKLSPGDIIEIEGSETTAAKVWRADRQDWN
TDTVRIDGFTRQNADVGIGERVTIRKADAEKADKLVLAPPEEASVQFGSDAAGMVKRQIL
KRPVVERDIVPVMSSTNHPFMRSPGQAIPLIAVETEPEGVCLITEDTDVELREEPISGFE
KTGGGITYEDIGGLSSEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLA
KAVANETSASFFSIAGPEIISKYYGESEQQLREIFEDASEEAPSIIFIDELDSIAPKRED
VTGEVERRVVAQLLTMMDGLESRGQVIVIAATNRVDSVDPALRRPGRFDREIEIGVPDEV
GREEILQIHTRGMPLSDDVALSNLATETHGFVGADIESLTKEAAMKALRRYLPEIDLDEE
DIPPSLIDRMIIKREDFRGALNEVSPSAMREVLVELPKISWDDVGGLDDAKEQVQESVEW
PMNSPEKFERMGVSPPSGVLLYGPPGTGKTLMAKAVANETDANFISVRGPQLLSKWVGES
EKAIRQTFRKARQVAPTVIFFDELDSLAPGRGGETGSNVSERVVNQLLTELDGLEEMEEV
MVIGATNRPDMIDPALIRSGRFDRLVMVGEPGIEGREQILKIHTDDTPLSPDVSLRELAE
MTDGYVGSDLESIGREAAIEALREDDDAEMVEMRHFRQAMENVRPTITDDIRDYYEQMQD
EFKGGGEPQQTRGGGRIGFQ
NT seq 2223 nt   +upstreamnt  +downstreamnt
atgaacgaggttcaactggaggtcgcgaaagcgtacccgaacgactcggggcgcggtatc
gctcgcctggatccggacacgctcttgcatctcaagctctcgcccggcgacatcatcgag
atcgagggaagtgagaccaccgccgcgaaagtgtggcgtgcggatcgacaggactggaac
accgacacggtgcgcatcgacggtttcacgcgacagaacgccgacgtgggcatcggcgaa
cgcgtgacgatccgcaaggccgacgccgagaaggccgacaagctcgtgctggctccgccg
gaggaagccagcgtacagttcggctcggacgcggccggcatggtcaagcgccagatcctc
aagcgcccggtcgtcgagcgcgacatcgtccccgtaatgtccagtacgaaccacccgttc
atgcgctcgccgggccaggcgatcccgctgatcgccgtcgagaccgagccggagggcgtc
tgtctcatcaccgaggacacggacgtggagttgcgcgaagagcccatcagcggcttcgag
aagaccggcggcggcatcacctacgaggacatcggcggcctctccagtgagatccagcgg
gtccgcgaaatggtcgagttgccgatgaaacacccccagatcttcaagaagctcggcatc
gagccgccacagggggtgttgctccacggtccaccgggtacgggcaagaccctgctcgcg
aaggccgtcgccaacgagacctccgccagtttcttttctattgccggtccggagatcatc
tcgaagtactacggcgagtccgaacagcaactcagggagatcttcgaggacgccagcgag
gaggctccctcgatcatcttcatcgacgagctagactcgatcgcgcccaagcgcgaggac
gtgaccggcgaggtcgagcgccgcgtcgtcgcccagctgctgacgatgatggacggtctc
gaatcacgcggccaggtcatcgtcatcgccgcgaccaaccgcgtcgacagcgtcgacccg
gcactgcgccggccgggccggttcgaccgcgagatcgagatcggcgtccccgacgaggtc
ggccgcgaggagatcctccagatccacacccgcgggatgcctctctcggacgacgtggcc
ctctcgaatctggcgaccgagacccacggcttcgtcggtgccgacatcgagagcctgacc
aaagaggccgcgatgaaggcgctgcgtcggtacctccccgagatcgacttagacgaggag
gacatcccgccgagcctgatcgaccgcatgatcatcaaacgggaggacttccgcggggcc
ctcaacgaggtgagtcccagcgccatgcgggaggtgctggtcgagctcccgaagatctcc
tgggacgacgtgggcggtctcgacgacgccaaagagcaggtccaggagtccgtcgagtgg
ccgatgaacagcccggagaagttcgagcgcatgggcgtctcaccgccatctggcgtcctg
ctgtacgggccgccggggaccggaaagaccctgatggccaaagccgtcgccaacgagact
gacgccaacttcatctcggtgcggggaccacagctcctctcgaagtgggtcggcgagtcg
gagaaggcgatccgtcagaccttccggaaggcccggcaggtcgcaccgacggtgatcttc
ttcgacgaactcgactccctcgcaccgggacgtggcggcgagaccgggagcaacgtttcc
gaacgcgtcgtcaaccagctgctgaccgaactcgacgggctcgaagagatggaagaggtg
atggtgatcggcgcgaccaaccggccggacatgatcgatccggcactgatccgctcgggt
cggttcgaccggctggtgatggtcggcgaacccggtatcgagggccgcgagcagatcctc
aagatccacaccgacgacacgccgctgtcgccggacgtgagcctgcgcgaactcgcggag
atgaccgacggctacgtcggctccgacctggagtcgatcggccgcgaggccgccatcgag
gcgctgcgcgaggacgacgacgccgagatggtcgagatgaggcacttccggcaggccatg
gagaacgtgcgcccgacgatcaccgacgacatccgcgactactacgagcagatgcaagac
gaattcaagggcggcggcgaaccccagcagacccgcggtggcggccgcatcggcttccag
tag

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