Halomicrobium mukohataei: Hmuk_1780
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Entry
Hmuk_1780 CDS
T00982
Name
(GenBank) AAA family ATPase, CDC48 subfamily
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
hmu
Halomicrobium mukohataei
Pathway
hmu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hmu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
Hmuk_1780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hmu03019
]
Hmuk_1780
03009 Ribosome biogenesis [BR:
hmu03009
]
Hmuk_1780
04131 Membrane trafficking [BR:
hmu04131
]
Hmuk_1780
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hmu04147
]
Hmuk_1780
Messenger RNA biogenesis [BR:
hmu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
Hmuk_1780
Ribosome biogenesis [BR:
hmu03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
Hmuk_1780
Membrane trafficking [BR:
hmu04131
]
SNARE
SNARE associated proteins
Others
Hmuk_1780
Autophagy
Aggrephagy
Other aggrephagy associated proteins
Hmuk_1780
Exosome [BR:
hmu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Hmuk_1780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
CDC48_N
AAA_lid_3
CDC48_2
AAA_16
RuvB_N
AAA_5
AAA_22
TIP49
AAA_2
AAA_33
AAA_14
NPHP3_N
nSTAND3
RNA_helicase
AAA_28
IstB_IS21
Mg_chelatase
AAA_7
AAA_18
AAA_3
ABC_tran
ATPase
DUF815
AAA_17
Sigma54_activat
NB-ARC
Parvo_NS1
AAA_30
AAA_24
TsaE
AAA_11
SLFN-g3_helicase
NACHT
PhoH
IPT
Vps4_C
Motif
Other DBs
NCBI-ProteinID:
ACV47894
UniProt:
C7P472
LinkDB
All DBs
Position
complement(1700923..1703145)
Genome browser
AA seq
740 aa
AA seq
DB search
MNEVQLEVAKAYPNDSGRGIARLDPDTLLHLKLSPGDIIEIEGSETTAAKVWRADRQDWN
TDTVRIDGFTRQNADVGIGERVTIRKADAEKADKLVLAPPEEASVQFGSDAAGMVKRQIL
KRPVVERDIVPVMSSTNHPFMRSPGQAIPLIAVETEPEGVCLITEDTDVELREEPISGFE
KTGGGITYEDIGGLSSEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLA
KAVANETSASFFSIAGPEIISKYYGESEQQLREIFEDASEEAPSIIFIDELDSIAPKRED
VTGEVERRVVAQLLTMMDGLESRGQVIVIAATNRVDSVDPALRRPGRFDREIEIGVPDEV
GREEILQIHTRGMPLSDDVALSNLATETHGFVGADIESLTKEAAMKALRRYLPEIDLDEE
DIPPSLIDRMIIKREDFRGALNEVSPSAMREVLVELPKISWDDVGGLDDAKEQVQESVEW
PMNSPEKFERMGVSPPSGVLLYGPPGTGKTLMAKAVANETDANFISVRGPQLLSKWVGES
EKAIRQTFRKARQVAPTVIFFDELDSLAPGRGGETGSNVSERVVNQLLTELDGLEEMEEV
MVIGATNRPDMIDPALIRSGRFDRLVMVGEPGIEGREQILKIHTDDTPLSPDVSLRELAE
MTDGYVGSDLESIGREAAIEALREDDDAEMVEMRHFRQAMENVRPTITDDIRDYYEQMQD
EFKGGGEPQQTRGGGRIGFQ
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaggttcaactggaggtcgcgaaagcgtacccgaacgactcggggcgcggtatc
gctcgcctggatccggacacgctcttgcatctcaagctctcgcccggcgacatcatcgag
atcgagggaagtgagaccaccgccgcgaaagtgtggcgtgcggatcgacaggactggaac
accgacacggtgcgcatcgacggtttcacgcgacagaacgccgacgtgggcatcggcgaa
cgcgtgacgatccgcaaggccgacgccgagaaggccgacaagctcgtgctggctccgccg
gaggaagccagcgtacagttcggctcggacgcggccggcatggtcaagcgccagatcctc
aagcgcccggtcgtcgagcgcgacatcgtccccgtaatgtccagtacgaaccacccgttc
atgcgctcgccgggccaggcgatcccgctgatcgccgtcgagaccgagccggagggcgtc
tgtctcatcaccgaggacacggacgtggagttgcgcgaagagcccatcagcggcttcgag
aagaccggcggcggcatcacctacgaggacatcggcggcctctccagtgagatccagcgg
gtccgcgaaatggtcgagttgccgatgaaacacccccagatcttcaagaagctcggcatc
gagccgccacagggggtgttgctccacggtccaccgggtacgggcaagaccctgctcgcg
aaggccgtcgccaacgagacctccgccagtttcttttctattgccggtccggagatcatc
tcgaagtactacggcgagtccgaacagcaactcagggagatcttcgaggacgccagcgag
gaggctccctcgatcatcttcatcgacgagctagactcgatcgcgcccaagcgcgaggac
gtgaccggcgaggtcgagcgccgcgtcgtcgcccagctgctgacgatgatggacggtctc
gaatcacgcggccaggtcatcgtcatcgccgcgaccaaccgcgtcgacagcgtcgacccg
gcactgcgccggccgggccggttcgaccgcgagatcgagatcggcgtccccgacgaggtc
ggccgcgaggagatcctccagatccacacccgcgggatgcctctctcggacgacgtggcc
ctctcgaatctggcgaccgagacccacggcttcgtcggtgccgacatcgagagcctgacc
aaagaggccgcgatgaaggcgctgcgtcggtacctccccgagatcgacttagacgaggag
gacatcccgccgagcctgatcgaccgcatgatcatcaaacgggaggacttccgcggggcc
ctcaacgaggtgagtcccagcgccatgcgggaggtgctggtcgagctcccgaagatctcc
tgggacgacgtgggcggtctcgacgacgccaaagagcaggtccaggagtccgtcgagtgg
ccgatgaacagcccggagaagttcgagcgcatgggcgtctcaccgccatctggcgtcctg
ctgtacgggccgccggggaccggaaagaccctgatggccaaagccgtcgccaacgagact
gacgccaacttcatctcggtgcggggaccacagctcctctcgaagtgggtcggcgagtcg
gagaaggcgatccgtcagaccttccggaaggcccggcaggtcgcaccgacggtgatcttc
ttcgacgaactcgactccctcgcaccgggacgtggcggcgagaccgggagcaacgtttcc
gaacgcgtcgtcaaccagctgctgaccgaactcgacgggctcgaagagatggaagaggtg
atggtgatcggcgcgaccaaccggccggacatgatcgatccggcactgatccgctcgggt
cggttcgaccggctggtgatggtcggcgaacccggtatcgagggccgcgagcagatcctc
aagatccacaccgacgacacgccgctgtcgccggacgtgagcctgcgcgaactcgcggag
atgaccgacggctacgtcggctccgacctggagtcgatcggccgcgaggccgccatcgag
gcgctgcgcgaggacgacgacgccgagatggtcgagatgaggcacttccggcaggccatg
gagaacgtgcgcccgacgatcaccgacgacatccgcgactactacgagcagatgcaagac
gaattcaagggcggcggcgaaccccagcagacccgcggtggcggccgcatcggcttccag
tag
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