KEGG   Halomicrobium mukohataei: Hmuk_2425
Entry
Hmuk_2425         CDS       T00982                                 
Name
(GenBank) DEAD/H associated domain protein
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
hmu  Halomicrobium mukohataei
Brite
KEGG Orthology (KO) [BR:hmu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hmu03400]
    Hmuk_2425
Enzymes [BR:hmu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Hmuk_2425
    5.6.2.6  RNA 3'-5' helicase
     Hmuk_2425
DNA repair and recombination proteins [BR:hmu03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Hmuk_2425
SSDB
Motif
Pfam: DEAD_assoc DEAD Helicase_C WH_Lhr ResIII AAA_25 AAA_19
Other DBs
NCBI-ProteinID: ACV48535
UniProt: C7NY75
LinkDB
Position
2325483..2328302
AA seq 939 aa
MSETGADAFTALGGSVRSALSERGFTTPTEPQRKAIPPLAAGDDALVVAPTGTGKTETAM
LPVFDALADEDRFGIGALYVTPLRALNRDMRERLDWWGDALDLEIDVRHGDTTDYQRQQQ
ADDPPDVLVTTPETLQAMLTGSKLRTALEDVAHVVVDEVHELAAAKRGAQLTVGLERLRE
VSGPVQRIGLSATVGDPEAVGRFLTGDRGCRIVEVDVGSRLDVSVVRPTVTDADERLASE
LVTDPEVASHVRRIDELIAAHDSVLVFVNTRQTAEALGSRFKELGTNLGVHHGSLAKETR
IDVEDRFKEGDLDALLCTSSMELGIDVGHVDHVVQYGSPRQVARLLQRVGRAGHRRDLLS
SGTVVTTHPDDTLEALAITRQALDGEVEPAEIHDGSLDTVANQVPGIVMDVGEIRAMEAY
EIVTRAYPFRDLTTEEFREVVRELAENRVLWVDEENDRLEKRRGTWQYFYQNLSMIPDEA
TYDVEDVASGDQIGTLDEQFVVNFANPGEVFIQRGEMWRITNVDEDEEVVTVSPIEDPAG
EVPSWVGQEIPVPQAVAREVGELRRVAGRQLQEGAAADAVARDLTRRYEGDPATVESGLE
QLRDHEAPIPDDETIVVEMHGREVVVNACLGHQVNETLGRLLSSLVGQRAGATVAMEVDP
YRIELELPSGVSGGDVIDVLETTDPEHVRHIIELSLKNADALKFKLAQVAAKFGTLKRWR
GSGSGRFGRDRLLAALEDTPIYDEAVREVFHEDLAVEATQTVLSAIQSGSIAVETVGDRT
PIGLGGRSSGRELLSPEHADASVIQTVRERIQNDRVLLFCLHCRDWRRKQQVGRVRDQPD
CPDCGSTRIAALNPWAEEVISAVRAEDKDEDQEKMTERAYRSASLVQSHGKQAVIALAAR
GVGPHNAARIINKLREDEDEFYRDILQQEREYARTQSFW
NT seq 2820 nt   +upstreamnt  +downstreamnt
atgagtgagacgggcgctgacgcgttcactgcactcggcgggtcggtccgatcggcgctg
tccgagcggggttttacgacgccgacggagccccagcgaaaggcgattccgccgctggcg
gcgggagacgacgcgctcgtcgtcgcgccgacggggaccgggaagacggagacggccatg
ctcccggtcttcgacgcgctggccgacgaggaccgctttggcatcggggcgctgtacgtc
acgcccctccgggcgctgaaccgcgacatgcgcgagcggctcgactggtggggcgacgcg
ctcgacctcgagatcgacgtgcgccacggcgacacgaccgactaccagcgccagcagcag
gccgacgatccgccggacgtgctcgtgacgacgccggagacgctccaggcgatgttgacc
ggctcgaagctccggacggcgctggaagacgtggcccacgtcgtcgtcgacgaggtccac
gaactcgcggccgccaagcgcggcgcacagctgaccgtcgggctggaacggctgcgcgag
gtgtcgggccccgtccagcggatcgggctctcggcgaccgtcggtgatccggaggcagtc
gggcgctttctcaccggcgaccgcggctgtcggatcgtcgaggtcgacgtggggagccgt
ctggacgtgtccgtcgtccggccgacggtcaccgacgccgacgagcgcctggccagcgaa
ctcgtcaccgatcccgaagtcgccagccacgtccgccggatcgacgaactgatcgcggcc
cacgactccgtcctggtgttcgtcaacacgcgccagacggcggaggcactgggctcgcgg
ttcaaagaactcggcacgaatctcggggtccaccacggatcgctggccaaggagacgcga
atcgacgtggaagaccgcttcaaggagggcgatctcgacgcgctgctctgtacctcgtcg
atggagctcgggatcgacgtgggccacgtcgaccacgtcgtccagtacgggagcccgcgc
caggtcgctcggctcctccagcgcgtcggccgcgcagggcaccgacgagacctgctgtct
tcggggaccgtcgtcaccacccatccagacgacacgctggaggcgctggcgatcacgcga
caggctctcgacggcgaggtcgagcccgccgagatccacgacggcagcctcgacaccgtg
gccaatcaggtccccggcatcgtcatggacgtcggcgagatccgcgcgatggaggcctac
gagatcgtcacgcgggcgtatcccttccgagacctgacgaccgaggagtttcgggaggtg
gtccgcgaactcgccgagaaccgcgtgctctgggtcgacgaagagaacgaccgactggag
aagcgacgggggacctggcagtacttctatcagaacctctcgatgatccccgacgaggcg
acctacgacgtggaggacgtggcctcgggcgaccagatcggcacgctcgacgagcagttc
gtcgtcaacttcgcgaaccccggcgaggtgttcatccagcgcggggagatgtggcggatc
acgaacgtcgacgaggacgaggaagtcgtcacggtctcgcccatcgaagacccggccggg
gaggtgccgtcgtgggtcggccaggagatcccggtcccacaggcggtcgcccgcgaggtc
ggcgagctgcgacgtgtcgccggcagacagctccaggagggggcagcggccgacgccgtg
gcccgcgatctcacgcggcgctacgagggcgacccggccaccgtcgagagcgggctcgaa
cagctccgagaccacgaggctccgatccccgacgacgagacgatcgtcgtcgagatgcac
ggccgcgaggtcgtcgtcaacgcctgtctgggccaccaggtcaacgagacgctcggccga
ctgctctcgtcgctggtcggtcagcgggccggcgcgaccgtcgcgatggaggtcgatccc
taccggatcgaactcgaactgccaagcggcgtcagcggcggcgacgtgatcgacgtgctg
gagacgaccgatcccgagcacgtccgccacatcatcgagctgagcctgaaaaacgccgac
gcgctgaagttcaagctcgcccaggtcgcggcgaagttcggcacgctcaagcgctggcgg
ggctctggctcgggccggttcgggcgcgatcgactgctggccgccctcgaagacacgccg
atctacgacgaggccgtccgcgaggtgttccacgaggacctggccgtggaagcgacccag
accgtcctgtcggcgattcagtccggctcgatcgccgtcgagaccgtcggcgaccgcacg
ccgatcggcctcggcggccgttcgtccggccgggagctgctctcgccggaacacgccgac
gccagcgtcatccagaccgtcagggagcgcatccagaacgaccgggtgctgctgttctgt
ctccactgtcgagactggcggcgcaaacagcaggtcggtcgcgtccgcgaccagcccgac
tgtcccgactgtgggtcgacgcgcatcgccgcactcaatccgtgggccgaggaggtgatc
tcggcggtgcgagccgaggacaaagacgaggaccaggagaagatgaccgaacgggcctac
cggtcggcgtcgctggtccagagccacggcaaacaggcggtgatcgcgctggccgcgcgc
ggcgtcggcccccacaacgccgctcgcatcatcaacaaactccgcgaggacgaagacgag
ttctaccgggacatcctccagcaggaacgcgagtacgcccgcacccaatcgttctggtga

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