KEGG   Halomicrobium mukohataei: Hmuk_2607
Entry
Hmuk_2607         CDS       T00982                                 
Name
(GenBank) beta-lactamase domain protein
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
hmu  Halomicrobium mukohataei
Pathway
hmu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hmu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Hmuk_2607
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hmu03019]
    Hmuk_2607
Messenger RNA biogenesis [BR:hmu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     Hmuk_2607
SSDB
Motif
Pfam: RNase_J_b_CASP Lactamase_B_2 Lactamase_B RMMBL
Other DBs
NCBI-ProteinID: ACV48713
UniProt: C7NZE5
LinkDB
Position
2503899..2505245
AA seq 448 aa
MEVEIATIGGYEEVGRQMTAVRAGDDIVIFDMGLNLSKVLIHDNVETERMHSLDLIDMGA
IPDDRVMSELEGDVKAIVPTHGHLDHIGAISKLAHRYDAPVVATPYTIELVKQEIKGEEK
FGVQNDLVKMEAGGTMSIGDKNELEFVNVTHSVIDAINPVLHTPEGSVVYGLDKRMDHTP
VLGDPIDMKRFREIGREGEGVLCYIEDCTNAGRKGRTPSESVARRHLKDVMTSIEDYDGG
IVATTFSSHIARVKSLVEFADEIGRQPVLLGRSMEKYSGTAERLDFVDFPDDLGMYGHRK
SVDRTFKRIMNDGKENFLPIVTGHQGEPRAMLTRMGRGETPYELEDGDKVLFSARVIPEP
SNEGQRYQSEQLLKMQGARLYDDIHVSGHLREEGHYQMLQALQPQNVIPGHQSMSGFAPY
VSLAESQGYKLGRDLHATSNGNRITLVE
NT seq 1347 nt   +upstreamnt  +downstreamnt
atggaagtagaaatcgcaacgattggcggttacgaagaggttggccgacagatgacggcc
gttcgcgcgggcgacgacatcgtcatcttcgacatgggcctgaacctctcgaaggtactg
attcacgacaacgtcgagaccgagcggatgcactcgctcgacctcatcgacatgggtgcg
atcccggacgaccgcgtcatgtccgaactcgaaggcgacgtgaaggccatcgtgccgaca
cacggccacctcgaccacatcggcgcgatctcgaagctcgcacaccgctacgacgcgccc
gtcgtcgcgacgccgtacacgatcgagctggtcaaacaagagatcaaaggcgaggagaag
ttcggcgtccagaacgacctggtgaagatggaagccggcggcacgatgtccatcggcgac
aagaacgaactggagttcgtcaacgtcacccactcggtcatcgacgccatcaaccccgtc
ctccacacgccggaagggtccgtcgtctacggtctcgacaagcggatggaccacacgccg
gtgctgggcgatcccatcgacatgaagcggttccgagagatcggccgcgagggcgagggc
gtcctctgttacatcgaggactgtacgaacgccggccggaagggccgaacgccctccgag
tccgtcgcacgccgacacctcaaagacgtcatgaccagcatcgaggactacgacggcggg
atcgtcgcgacgacgttctcctcgcacatcgcccgcgtgaagtctctggtcgagttcgcg
gacgagatcggtcgccagccggtactgctcggtcgatcgatggagaagtactccgggacc
gcagagcgactcgacttcgtcgacttccccgacgatctggggatgtacggccaccgcaag
tccgtcgaccggacgttcaagcggatcatgaacgacggcaaggagaacttcctgccgatc
gtcaccggccaccagggcgagccacgcgcgatgctcacccggatgggtcgaggcgagacg
ccctacgagctggaagacggcgacaaggtgctgttctcggcgcgggtcattcccgagccg
tccaacgagggccagcgctaccagtccgaacagctcctgaagatgcagggcgcgcgccta
tacgacgacatccacgtctcggggcacctccgcgaggagggccactaccagatgctccag
gctctccagccccagaacgtcattccgggccaccagagcatgtccgggttcgcaccgtac
gtcagcctcgccgagagccagggctacaagctcggccgcgacctgcacgcgaccagtaac
ggcaaccggatcacgctggtcgagtag

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