Halomicrobium mukohataei: Hmuk_2607
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Entry
Hmuk_2607 CDS
T00982
Name
(GenBank) beta-lactamase domain protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
hmu
Halomicrobium mukohataei
Pathway
hmu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hmu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Hmuk_2607
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hmu03019
]
Hmuk_2607
Messenger RNA biogenesis [BR:
hmu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Hmuk_2607
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
Lactamase_B_2
Lactamase_B
RMMBL
Motif
Other DBs
NCBI-ProteinID:
ACV48713
UniProt:
C7NZE5
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All DBs
Position
2503899..2505245
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AA seq
448 aa
AA seq
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MEVEIATIGGYEEVGRQMTAVRAGDDIVIFDMGLNLSKVLIHDNVETERMHSLDLIDMGA
IPDDRVMSELEGDVKAIVPTHGHLDHIGAISKLAHRYDAPVVATPYTIELVKQEIKGEEK
FGVQNDLVKMEAGGTMSIGDKNELEFVNVTHSVIDAINPVLHTPEGSVVYGLDKRMDHTP
VLGDPIDMKRFREIGREGEGVLCYIEDCTNAGRKGRTPSESVARRHLKDVMTSIEDYDGG
IVATTFSSHIARVKSLVEFADEIGRQPVLLGRSMEKYSGTAERLDFVDFPDDLGMYGHRK
SVDRTFKRIMNDGKENFLPIVTGHQGEPRAMLTRMGRGETPYELEDGDKVLFSARVIPEP
SNEGQRYQSEQLLKMQGARLYDDIHVSGHLREEGHYQMLQALQPQNVIPGHQSMSGFAPY
VSLAESQGYKLGRDLHATSNGNRITLVE
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggaagtagaaatcgcaacgattggcggttacgaagaggttggccgacagatgacggcc
gttcgcgcgggcgacgacatcgtcatcttcgacatgggcctgaacctctcgaaggtactg
attcacgacaacgtcgagaccgagcggatgcactcgctcgacctcatcgacatgggtgcg
atcccggacgaccgcgtcatgtccgaactcgaaggcgacgtgaaggccatcgtgccgaca
cacggccacctcgaccacatcggcgcgatctcgaagctcgcacaccgctacgacgcgccc
gtcgtcgcgacgccgtacacgatcgagctggtcaaacaagagatcaaaggcgaggagaag
ttcggcgtccagaacgacctggtgaagatggaagccggcggcacgatgtccatcggcgac
aagaacgaactggagttcgtcaacgtcacccactcggtcatcgacgccatcaaccccgtc
ctccacacgccggaagggtccgtcgtctacggtctcgacaagcggatggaccacacgccg
gtgctgggcgatcccatcgacatgaagcggttccgagagatcggccgcgagggcgagggc
gtcctctgttacatcgaggactgtacgaacgccggccggaagggccgaacgccctccgag
tccgtcgcacgccgacacctcaaagacgtcatgaccagcatcgaggactacgacggcggg
atcgtcgcgacgacgttctcctcgcacatcgcccgcgtgaagtctctggtcgagttcgcg
gacgagatcggtcgccagccggtactgctcggtcgatcgatggagaagtactccgggacc
gcagagcgactcgacttcgtcgacttccccgacgatctggggatgtacggccaccgcaag
tccgtcgaccggacgttcaagcggatcatgaacgacggcaaggagaacttcctgccgatc
gtcaccggccaccagggcgagccacgcgcgatgctcacccggatgggtcgaggcgagacg
ccctacgagctggaagacggcgacaaggtgctgttctcggcgcgggtcattcccgagccg
tccaacgagggccagcgctaccagtccgaacagctcctgaagatgcagggcgcgcgccta
tacgacgacatccacgtctcggggcacctccgcgaggagggccactaccagatgctccag
gctctccagccccagaacgtcattccgggccaccagagcatgtccgggttcgcaccgtac
gtcagcctcgccgagagccagggctacaagctcggccgcgacctgcacgcgaccagtaac
ggcaaccggatcacgctggtcgagtag
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