Halomicrobium mukohataei: Hmuk_3369
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Entry
Hmuk_3369 CDS
T00982
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
hmu
Halomicrobium mukohataei
Brite
KEGG Orthology (KO) [BR:
hmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hmu03400
]
Hmuk_3369
Enzymes [BR:
hmu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Hmuk_3369
DNA repair and recombination proteins [BR:
hmu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Hmuk_3369
Prokaryotic type
Hmuk_3369
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
GNAT_like
Motif
Other DBs
NCBI-ProteinID:
ACV49455
UniProt:
C7P560
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All DBs
Position
pHmuk01:complement(171079..172659)
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AA seq
526 aa
AA seq
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MSDGPTAVTPDADDVPTTTDGCVVWHRRNLRTTDHGALSYAGEEYDTVLPLFVFDPQFYG
NDGLACDARLLLLHESVESLRRLYEAVGGTLSYAHGDPLSVLSALAAAGWDIVATADPTA
RYGRQRDDRAAAHCDVRFVDSDGLVRDQAWPRAGWSDRVEAWFESSPHSWDPADVSFASL
PGTVSVADIERTYDVHAAKTTVPPGGRAAGARRLRQFVADIEQYPGNISAPTDARTGTSG
LSPHLRFGSLSVREVYRYVMDNAPPCTGREMFVSRLYWNKHYHQKLEDWSGWTTTAVNPA
MRGCRAESHDPELVTAWKRGTTGFPMVDASMRCLVETGWLNFRMRAMCASVFADLFQQPW
QIGADFYHYHLIDADPAINYTQWQSQAGTVGTNLMRIYNPIKQVRDNDPDGTFVSTYVPE
LAPLPAEYLPRPEKTPLHVQEACGVEIGTDYPYPVVEYEAARQRAIERYERLEPAARQAL
QEPAVARRASLSSQSRPPDGSDDTSTVTEAGPQQRGLDAYTETDKE
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgggccgacagcggtgacacccgacgccgacgacgtgccgacgacgacggac
ggctgtgtcgtctggcaccgccgcaatctccggacgaccgaccacggcgcgctctcgtac
gcgggcgaggagtacgacaccgtcttgccgctgttcgtcttcgacccgcagttctacggt
aacgacggactcgcctgtgacgccagactcctcctcctccacgagtccgtcgagagtctc
cggcgactgtacgaggctgtcgggggaacgctcagctacgcccacggtgatccgctgtcg
gtgctctcggctctggcagcggccggctgggacatcgtcgcgacggccgacccgaccgca
cgctacgggcgtcagcgagacgaccgggccgcggcacactgtgacgtgcgcttcgtcgac
agtgacgggctggttcgagaccaggcgtggccgcgtgcggggtggagcgaccgcgtcgag
gcgtggttcgagtcgtcgccccactcctgggacccggccgacgtttcgttcgcctcgctg
ccggggacggtgtccgtcgccgatatcgagcgtacgtacgacgtacacgcggcgaagacg
acggtcccacccggcggccgagcggcgggggccagacgactccgacagttcgtcgcagac
atcgagcagtatcccggcaacatctccgcgccgacagacgcacggaccggtaccagcggg
ctctcgccgcacctccggttcggatcgctgtcggtacgggaagtctaccggtacgtgatg
gacaacgcaccgccgtgtaccggccgcgagatgttcgtctccaggctctactggaacaaa
cactaccaccagaaactggaagactggagcggctggacgacgacggcggtcaaccccgca
atgcgagggtgtcgggcggagtcacacgaccccgagctggtgactgcctggaagcggggg
accaccggctttcccatggtcgacgcgtccatgcggtgtctcgtcgagaccgggtggctc
aacttccggatgcgagcgatgtgtgcgagcgtcttcgccgacctgttccagcagccctgg
cagatcggcgcggacttctatcactaccacctgatcgacgccgatccggcgataaactac
acccagtggcagtcacaggccggtacggtcggaacgaacctcatgcgcatctacaacccg
atcaaacaggtgcgtgacaacgatcccgacggcacgttcgtctcgacgtacgtcccggaa
ctggctcctctcccggccgagtacctgccacgccccgaaaagacaccgctccacgttcag
gaagcgtgtggcgtcgagatcggcacggactatccgtaccccgtcgtcgagtacgaggca
gccagacagcgtgcgatcgagcgctacgaacgtctcgaaccggccgcccgccaggccctc
caagagccggcggtcgctcgacgagcgtcactgtcctcgcagtcacggccaccggacggg
tcggacgacacgtcgacggtgaccgaagcgggtccacagcagcgcggcctggacgcgtac
acggagacagacaaggagtga
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