Helicobacter mastomyrinus: V3I05_00620
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Entry
V3I05_00620 CDS
T11030
Symbol
hemE
Name
(GenBank) uroporphyrinogen decarboxylase
KO
K01599
uroporphyrinogen decarboxylase [EC:
4.1.1.37
]
Organism
hmy Helicobacter mastomyrinus
Pathway
hmy00860
Porphyrin metabolism
hmy01100
Metabolic pathways
hmy01110
Biosynthesis of secondary metabolites
hmy01240
Biosynthesis of cofactors
Module
hmy_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:
hmy00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
V3I05_00620 (hemE)
Enzymes [BR:
hmy01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.37 uroporphyrinogen decarboxylase
V3I05_00620 (hemE)
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Motif
Pfam:
URO-D
YndJ
Motif
Other DBs
NCBI-ProteinID:
XAM18234
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Position
complement(110452..111474)
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AA seq
340 aa
AA seq
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MIFIDACFRKPTPYTPIWLMRQAGRYLSEYRQTRTKAGSFLDLCKNVELATEVTLQPIEI
LDVDAAILFSDILVVPMEMGLPLEFLAGEGPHFQRTVSTMEDINALSERAYTRLNYVYDA
VSAIRAKLPKDKALIGFCGSPWTLATYMIEGQGSKTYTKSKAMLYKEPQILRALLERLSE
ELKYYLERQILAGANAVQIFDSWAAALECEAYMEFSWKYMKDIASYLKAKYPHIPVMLFP
KGIAGYLDKIDGVFDVFGVDWSTPMNLAQAKLGGKYVLQGNLEPSRLYDIESMERSVDEI
LSIMGKKPGHIFNLGHGMLPDLPRENTIALVKMVRDKSRR
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgatttttatcgatgcgtgttttaggaagcccacaccctatacgcctatatggcttatg
cgacaggctggacgctatttgagtgaatataggcaaactcgcacaaaggcagggagcttt
ttagatttatgtaaaaatgtggagcttgctacagaggtaacgcttcagcccatagagatt
ttagatgttgatgcggcgattttatttagtgatattttagtagtgccgatggagatgggg
ctgccactggagtttttagccggtgagggaccacattttcaaagaacagtcagcacgatg
gaggatataaatgctttaagtgagagggcatatacacgtcttaattatgtctatgatgcg
gtaagtgctatccgcgccaagctccctaaagataaggcactcataggattttgtggttct
ccttggacgttggctacctatatgattgaagggcaggggagtaaaacatatacaaagagc
aaggctatgttatataaagagccacagattctaagagcattgcttgagagattaagcgag
gagttgaaatactatttggagaggcagattctcgctggggcaaatgcagtgcaaatcttt
gatagctgggcagctgcgttagaatgtgaggcgtatatggaatttagttggaaatatatg
aaagatatcgcctcatatcttaaggcgaaatatccgcatatccctgttatgcttttccct
aaggggattgcggggtatttagataaaatcgatggggtatttgatgtttttggtgtggat
tggagcacacctatgaatcttgctcaagcaaagttaggaggaaaatatgttttgcagggg
aatttagagccatcaagattgtatgatatagaatctatggagagaagtgtagatgagatt
ctctccataatgggcaaaaagcccggacatatctttaatttagggcacggaatgctccct
gatttaccacgtgaaaatactatcgcgcttgtaaaaatggtgagggataaaagtaggcga
taa
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