KEGG   Helicobacter mastomyrinus: V3I05_00755
Entry
V3I05_00755       CDS       T11030                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
hmy  Helicobacter mastomyrinus
Pathway
hmy00300  Lysine biosynthesis
hmy00470  D-Amino acid metabolism
hmy01100  Metabolic pathways
hmy01110  Biosynthesis of secondary metabolites
hmy01120  Microbial metabolism in diverse environments
hmy01230  Biosynthesis of amino acids
Module
hmy_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:hmy00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    V3I05_00755 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    V3I05_00755 (dapF)
Enzymes [BR:hmy01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     V3I05_00755 (dapF)
SSDB
Motif
Pfam: DAP_epimerase
Other DBs
NCBI-ProteinID: XAM18260
UniProt: A0ABZ3F794
LinkDB
Position
complement(137009..137800)
AA seq 263 aa
MQFVKYSSNGNDFLIFHTQNYNDGSRAYLAQKVCDRHNGIGADGMAVLIPAVGEEYAYKW
EFYNADGSYASMCGNATRSVGHYAYMEGLAPKQHCFLSAVGIIRIEIDSHNTSLVQSDLG
VYTLLQRDIIESNPYDVPSWTLLDTGVPHLVGFVKDKNALPAKKEHILEHLRYKYNANVS
IAYIEREHIIYMSYERGVEDITQACGTGAAAVFAIALANGLCDKNAILIPPSKERLELSL
SQDSHILFKGAVSRIARCEWLLD
NT seq 792 nt   +upstreamnt  +downstreamnt
atgcaatttgtgaaatatagcagtaatggaaatgattttctcattttccatacacagaac
tataatgatggctcacgtgcgtatcttgcgcaaaaagtttgcgatagacataatggcata
ggggctgatggtatggcggtgcttatccctgctgtgggggaagaatatgcctataaatgg
gaattttacaatgctgatggctcatatgcaagtatgtgtggcaatgctactagaagtgtg
gggcattatgcctatatggaaggattagcaccaaagcagcactgctttttaagtgcagta
ggaattattcgcatagagatagattcgcacaatacgtctctagtgcagagcgatttaggc
gtatatacattgttgcagagggatattatagaatctaatccttatgatgtgccatcttgg
acattgcttgatacgggagtaccacatttggtgggatttgtcaaagataaaaatgcgcta
cctgcaaaaaaagagcatattttggagcatttgaggtataaatataatgccaatgtaagt
atagcttacatagagagagaacatatcatttatatgagctatgagcggggtgtggaggat
atcacacaggcttgtggcacaggggcagcagcggtatttgccattgctttggctaatggt
ttatgtgataaaaatgccattttgatacccccaagcaaggagagactagagcttagctta
agccaagattcacatattttgtttaaaggtgcggtaagccgcatagcgcgttgtgaatgg
ctgctggactag

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