Helicobacter mastomyrinus: V3I05_02120
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Entry
V3I05_02120 CDS
T11030
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
hmy Helicobacter mastomyrinus
Pathway
hmy00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hmy00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
V3I05_02120 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hmy01007
]
V3I05_02120 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hmy03016
]
V3I05_02120 (lysS)
Enzymes [BR:
hmy01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
V3I05_02120 (lysS)
Amino acid related enzymes [BR:
hmy01007
]
Aminoacyl-tRNA synthetase
Class II (A)
V3I05_02120 (lysS)
Transfer RNA biogenesis [BR:
hmy03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
V3I05_02120 (lysS)
Prokaryotic type
Other AARSs
V3I05_02120 (lysS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
PH_34
TOBE_3
Motif
Other DBs
NCBI-ProteinID:
XAM18497
UniProt:
A0ABZ3F8P4
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All DBs
Position
425643..427196
Genome browser
AA seq
517 aa
AA seq
DB search
MFSNFYIQQRIKKKELMQEAGLNPYTNKATRTLSNKAFLDKYQYLKLQDIAESSSKNSEN
ESIVGRVRFIRLMGKACFIKIQDESALLQAYISKDDVGEDFAHIKKILEVGDIINVQGYA
FITKTGELSIHARSFQILTKSIVPLPEKFHGLSDVELRYRQRYVDLIANEEVKETFKMRS
QIISCVRAFFEKKGFLEVETPMLHPIPGGANARPFITHHNALDVDRYLRIAPELYLKRLI
VGGFEAVFELNRNFRNEGMDHSHNPEFSMIEFYWAYKTYEDLITLTKELFDFLFNSLKLP
KILTYNQDNIDFNQWSIMSYKDALINIGGLDEKIINDKNALLAHLQAKHLKVDTSMGYGK
LLAEAFDEFVEHKLINPTFITQYPIDISPLARRNDENPLIADRFELFIGGREIANGFSEL
NDPLDQLERFKEQVKAKDAGDEEAQYMDEDYVWALAHGMPPTAGEGIGIDRLVMLLCNAK
TIKDVILFPALKPTKPNFDIISSKDTQTNIIEHKEGK
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgttttcaaatttctatatccaacaacgtatcaaaaaaaaggaacttatgcaagaagca
gggcttaatccttataccaacaaagctacgcggactttaagcaataaggcatttttagat
aaataccaatatcttaaattgcaagatattgcagaatcttcatccaaaaactctgaaaat
gaaagtattgtaggacgcgtgagatttatccgcctgatgggcaaggcgtgttttattaag
attcaagatgagagtgctttactccaagcctatatttcaaaagacgatgtgggagaggat
tttgcacacattaagaaaatccttgaagtaggagatattatcaatgtgcaaggctatgcc
tttataaccaaaacaggagagttaagcatacacgcgcgttcttttcaaattcttactaaa
agcattgtgccactgcctgaaaagttccacgggcttagcgatgtggagcttcgctatcgt
cagcgctatgtggatttgattgccaatgaagaggtaaaagagactttcaaaatgcgtagt
caaattatctcctgtgtgagggctttctttgagaaaaagggctttttagaggtagaaaca
cctatgcttcaccctattcccggtggggcgaatgcacgtccttttatcactcatcataat
gcccttgatgtggatagatatttgcgtatcgcacctgagctctatctcaaaaggcttatt
gtagggggatttgaagccgtatttgaacttaatcgcaactttcgcaatgaaggtatggac
cactctcataatcccgagtttagtatgattgaattttattgggcatataaaacctatgag
gatttaatcactctcactaaagaactttttgactttctttttaactccctcaaactccct
aaaattctaacttacaatcaagataacattgattttaaccaatggagcattatgagttat
aaagacgcactcataaatataggcggcttagatgaaaagattataaatgataaaaatgca
ctcttagcccacctccaagcaaaacatctcaaagtcgatacatctatgggctatggcaaa
cttttagccgaggcttttgatgagtttgtagagcataaacttatcaatcctacttttatt
acacaataccccattgacattagccctctcgcaagacgtaatgatgagaatcctttgatc
gcagatagattcgaactttttatcggtgggagagaaatcgccaatggatttagtgaactc
aacgaccctctagaccagctagaacgttttaaagagcaggttaaggcaaaggatgcaggt
gatgaagaggctcaatatatggacgaagactatgtatgggcattagcacacggtatgcca
cccacagcgggagagggtataggcattgatagattggtaatgcttttatgcaatgcaaaa
acaattaaagatgtaattttatttcctgcattaaagccaactaagccaaactttgatata
atatcctcaaaagatacccaaaccaacatcatagagcataaggagggcaaatga
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