Helicobacter mastomyrinus: V3I05_02125
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Entry
V3I05_02125 CDS
T11030
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
hmy Helicobacter mastomyrinus
Pathway
hmy00260
Glycine, serine and threonine metabolism
hmy00460
Cyanoamino acid metabolism
hmy00630
Glyoxylate and dicarboxylate metabolism
hmy00670
One carbon pool by folate
hmy00680
Methane metabolism
hmy01100
Metabolic pathways
hmy01110
Biosynthesis of secondary metabolites
hmy01120
Microbial metabolism in diverse environments
hmy01200
Carbon metabolism
hmy01230
Biosynthesis of amino acids
hmy01240
Biosynthesis of cofactors
hmy04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
hmy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
V3I05_02125
09102 Energy metabolism
00680 Methane metabolism
V3I05_02125
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
V3I05_02125
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
V3I05_02125
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
V3I05_02125
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
V3I05_02125
Enzymes [BR:
hmy01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
V3I05_02125
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Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
XAM18498
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Position
427193..428443
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AA seq
416 aa
AA seq
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MSYLIQNQDSEIFELIEKELQRQNDHLEMIASENFTFPSVMEAMGSILTNKYAEGYPSKR
YYGGCEFVDKIEEIAIERAKKLFGAAFANVQPHSGSQANAAVYAALLKPYDKILGMDLSH
GGHLTHGAKVSTSGQLYQSFFYGVELNGYIDYDKLALQAQVVKPNILVCGFSAYTRELDF
KRLREIADSVGAYLMGDIAHVAGLVVAGEYPNPFPHCHIVTTTTHKTLRGPRGGMILTND
EELIAKINKAVFPGIQGGPLMHVIAGKAVGFKENLKPEWKVYAKQVKANIQALAKILIKR
KYNLVSGGSDNHLVLMSFLNNDFSGKDADLALGNAGITINKNTVPGETRSPFVTSGIRIG
SPALTARGMKEKEFEWIAERIADILDDIHNTNLQTTIKSQVKDFAKDFRIYERPIF
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgagttatttaatccaaaaccaagatagtgagatatttgagctaatagaaaaagaatta
caacgacaaaatgaccatctagagatgattgcgagtgaaaatttcacatttcctagcgtt
atggaggctatgggaagcattcttaccaataaatatgctgagggctatccatccaaacgc
tattatggaggttgcgagtttgtcgataaaatcgaggagattgccattgagagggctaaa
aagctctttggtgccgcttttgctaatgtgcaacctcattcaggttcacaggcaaatgca
gcagtgtatgcagcactcttaaagccttatgataagattctaggtatggatttaagccac
ggagggcatctcacacacggggcgaaggtaagcacttcagggcaactttatcaaagtttt
ttctatggcgtggagcttaatggatatattgattatgacaaactcgctcttcaagcccaa
gtagtgaagccaaatattttagtatgcggcttttctgcctatacacgtgagcttgatttt
aaacgattgcgtgaaatcgcagattctgtaggggcctaccttatgggagatattgcccac
gttgctggattagtcgtagcgggagaatatcctaatcccttcccacattgccacatcgtt
actacaaccacacataagaccttgcgaggaccaaggggcggaatgattctcaccaacgat
gaggagctaatagccaaaatcaataaggctgtctttcccgggattcagggcggaccactt
atgcacgtaatcgcgggtaaggcagtaggtttcaaagaaaatctcaagcccgaatggaaa
gtgtatgcaaagcaagtcaaagcaaatatccaagcacttgcaaaaatcctcattaagcgt
aaatacaaccttgtaagtggcggaagcgataatcaccttgtgctaatgagcttcttaaat
aacgattttagcggcaaagacgcggatttagccttaggcaatgccggaatcacaattaat
aaaaacactgttccgggtgagacccgctctccttttgttacaagcggtataaggataggt
tctcctgctcttaccgcaagaggtatgaaagaaaaagagtttgaatggattgcagagagg
atagcagatatacttgatgatattcacaataccaacttacagacaacaattaaatctcaa
gtcaaagattttgccaaagattttagaatctatgaacgaccaattttttag
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