Helicobacter mastomyrinus: V3I05_04195
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Entry
V3I05_04195 CDS
T11030
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
hmy Helicobacter mastomyrinus
Pathway
hmy02020
Two-component system
hmy02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
hmy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
V3I05_04195
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
V3I05_04195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hmy03021
]
V3I05_04195
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
hmy02035
]
V3I05_04195
Transcription machinery [BR:
hmy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
V3I05_04195
Bacterial motility proteins [BR:
hmy02035
]
Flagellar system
Flagellar assembly proteins
Stator
V3I05_04195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
UPF0122
Sigma70_ECF
GerE
COMMD8_HN
BACK
MarR_2
Motif
Other DBs
NCBI-ProteinID:
XAM18885
UniProt:
A0ABZ3F864
LinkDB
All DBs
Position
850299..851006
Genome browser
AA seq
235 aa
AA seq
DB search
MKSINKNNGYNQTLKYAQDELALQYLPAVKSMAFRLKERLPSSIEMADLVSIGTEELIKL
ARRYDSNINDSFWGFAKTRVNGAMLDYLRNLDILSRANRRLVKHIDYEISKYFNDHQEEP
SDEYLAKILNEDVAKIKEARIASDVYALVPIDEQYNAICAENILEDVQHEELMEIIHKIL
KKLSSREQMVIQLYYFEELSLKEISEILEITESRISQIAKEVIKKIRQALGDING
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaagcattaataaaaataatggatacaatcaaacgcttaaatatgctcaagatgag
cttgccttacaatatttgcctgcggtaaaaagtatggcatttcgccttaaagagagattg
cctagctcgattgaaatggcggatttggtatccattggcacagaagagctcattaagctt
gcacgcagatatgatagcaatatcaacgattcgttttggggttttgcaaaaacgcgggtt
aatggcgcaatgctggattatttacgtaatcttgatattctctcccgtgctaatcgtaga
ttggtaaaacatatagattatgaaatttcaaaatactttaatgatcatcaagaagaacca
agcgatgagtatttagcaaagattctcaatgaagatgtagccaaaataaaagaggcgcgt
atagcttctgatgtatatgcacttgtgccaattgatgaacaatataatgccatttgtgca
gaaaacatcctcgaagatgtgcagcacgaagagcttatggagattatccataagatatta
aaaaaacttagtagcagggagcaaatggtaatccagctctactactttgaagagcttagt
ctaaaagagattagcgagattttagaaattacagaatcccgcatttcgcaaattgcaaaa
gaagtgattaagaagattcgacaagcactaggagatataaatggctga
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