Helicobacter mastomyrinus: V3I05_04240
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Entry
V3I05_04240 CDS
T11030
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
hmy Helicobacter mastomyrinus
Pathway
hmy03030
DNA replication
hmy03430
Mismatch repair
hmy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hmy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
V3I05_04240
03430 Mismatch repair
V3I05_04240
03440 Homologous recombination
V3I05_04240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hmy03032
]
V3I05_04240
03400 DNA repair and recombination proteins [BR:
hmy03400
]
V3I05_04240
Enzymes [BR:
hmy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
V3I05_04240
DNA replication proteins [BR:
hmy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
V3I05_04240
DNA repair and recombination proteins [BR:
hmy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
V3I05_04240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
RuvB_N
AAA_22
AAA_30
AAA_5
AAA_14
AAA_19
TIP49
AAA_16
DEAD
ResIII
Sigma54_activ_2
PIF1
Motif
Other DBs
NCBI-ProteinID:
XAM18893
UniProt:
A0ABZ3F6V3
LinkDB
All DBs
Position
858677..860428
Genome browser
AA seq
583 aa
AA seq
DB search
MNSTALALKYRPTCFSDLIGQNAISQTLSLALDSKHISHAYLFSGLRGSGKTSSARIFAR
ALQCESGPTSTPCGTCASCVAALQNRHIDIIEMDAASSRGIDDIKRVIEQTKYSPSFARY
KIFIIDEVHMLSKEAFNALLKTLEEPPEFVKFILATTDPLKLPATILSRTQHFRFKQIPH
RLVIEHISNILNKEGVSYEAQALDIIARSGAGSLRDTLTLLDQAIIFCKNHIEVAAISEM
LGVVDPQVLGDYFLSIVHKDEAKTHGILEMLFEYECEMILDEMMLFLKDKLLQKDNDFPP
LLLDRFARILSESKSLLSLNTDGVFVLLLCTLKMQEAMKVKDIESMIEELENELFGQQDA
THIQNRQNPLSPSIPHTSPTSPTPMANTTNTITPTPAQTPPATTAPLSAKMRFDTLITKL
KDRNEQLGVAFEHNVRFVEFIESSHLLRWQSVAQGADKALLKEHSKIVFSLVRAVFGDGT
QIEQVATQEPLSQDTTHTSQSPTPSLESTTNTMNTDIAQPTSIPHTQSLAAPTPNIPNDA
QSTETQNVSSSDSKQAFLNQNKDLIMAINESVGIKKVITKDLL
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgaattctaccgccctagccttgaaataccgccctacttgctttagtgatttaataggg
caaaatgccatttctcaaacgctctccttagcattagattctaagcatatctctcacgca
tatctttttagtgggcttcgcggaagtggcaagacgagttcagcgagaatcttcgcccgt
gccttgcagtgcgaaagcggacctacaagcacgccttgtggcacttgcgcgagctgtgta
gcggcattgcaaaacagacatatagatattatagaaatggacgcagcaagttcgaggggg
attgatgatattaagcgtgtaatcgagcagacaaaatacagcccgagctttgcacgatat
aagatttttatcatcgatgaggtgcatatgctaagcaaagaggcttttaacgccttactt
aagacacttgaagaaccaccagaatttgtaaagtttatccttgctactaccgacccattg
aagcttccagcaactattctaagtcgcacacagcattttagatttaaacaaatccctcac
agacttgtcatagaacatattagcaacattcttaacaaagagggcgtaagttatgaggca
caagcccttgatattatcgcacgtagtggggcgggaagtttgcgcgatacgcttacctta
ctagaccaagccattatattttgcaaaaatcacattgaagtagcagccataagtgagatg
ctaggcgtggtagatccgcaggtattgggggattacttcttaagtatcgtacataaagat
gaggcaaaaacgcatggcatacttgagatgctctttgaatatgaatgcgaaatgatactt
gatgagatgatgctgtttttaaaagataaattattgcaaaaagataacgatttcccgcca
ttgctccttgatagatttgcaaggattttgagcgaatctaaaagcctcttaagccttaat
accgatggtgtgttcgtgctgcttttatgcacactcaaaatgcaagaagcaatgaaagta
aaagatatagaatctatgatagaggagcttgaaaatgagctttttggacagcaagatgcc
actcatatacaaaatagacaaaaccccttaagtccttcaatcccgcatacatctcctact
agccccacccctatggcaaatacaaccaatactataacacctactcccgctcaaacaccc
cctgccacaacagccccacttagtgcaaaaatgcgttttgatacattgattaccaaactc
aaagaccgcaatgagcaattaggcgtagcatttgagcacaatgtccgctttgtcgaattt
atagaatctagccatcttttgcgttggcagagtgtagcacaaggtgcagataaggcactt
ttaaaagagcatagcaaaattgttttttctcttgttcgggctgtttttggtgatggcaca
caaatcgagcaagttgccacacaagagcctctttcgcaagataccacccacacctcccaa
tctcccactccatctttagaatccactacaaatactatgaatacagatatagcacagcct
acttcaatccctcacacacagtcattagcagcacccacaccaaatattccaaatgatgca
caatccacagaaacacaaaatgtgtcttcaagcgattctaaacaagccttcttaaatcaa
aataaagatttgataatggctatcaatgaaagcgtggggattaaaaaagtaatcacaaag
gatttgttgtga
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