Helicobacter mastomyrinus: V3I05_04385
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Entry
V3I05_04385 CDS
T11030
Name
(GenBank) AAA family ATPase
KO
K03631
DNA repair protein RecN (Recombination protein N)
Organism
hmy Helicobacter mastomyrinus
Brite
KEGG Orthology (KO) [BR:
hmy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hmy03400
]
V3I05_04385
DNA repair and recombination proteins [BR:
hmy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
V3I05_04385
TLS (translesion DNA synthesis) factors
Other SOS response factors
V3I05_04385
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
AAA_22
AAA_29
RsgA_GTPase
PRK
Adenine_glyco
DUF1192
Motif
Other DBs
NCBI-ProteinID:
XAM18922
UniProt:
A0ABZ3F6W3
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All DBs
Position
complement(886476..888020)
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AA seq
514 aa
AA seq
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MIKRILIHNSPAFKDVELYMQEGFNVFSGASGSGKSVFMESLLAIFGIKESNADLIEANI
NVETMNFDWEGYGIPHEEDEDEIVLSILKKDKTRYFLNHASSSKKKLHDIVHGFAKHIST
KGADELKNSNILRILDNFIAKKHSVHKSTLTTYESDFKQLCTLKEQLKEIESNEANITSL
KEFAAFEIAKIEKINPKEGEYEELLNLKKMLSKQEKIKEQLLKVREVLELSQSFEGFLNL
VDKSCPNLIDGLSEFEAIVEQEAERMENLELMNVEELLDKIAGLAELIRKFGSITNALNY
LQGQKQKLAQYEHLSFDKQALQKQIQALEATCEANAQTLHHNRQKCAKDLNARIEHLCTQ
LRLKQSHLLLKEVPLYQKGISECELRLGDSDVNVISSGEYNRLRLVMMCIDMELQPRKGI
LVLDEIDANLSGEESEGVAQILKTLSRDYQIFAISHQTHMPSLADNHYLVEKRGQSSVIT
KLDFEGRVQEVARIISGSNITPQALEFARTHLSK
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgattaagcgtatcttaatccataattcccctgcctttaaagatgtagagctgtatatg
caggagggatttaatgtctttagcggcgcgagtgggagcgggaaatccgtatttatggaa
tccttattggcgatttttgggattaaggagagcaatgcggatttgattgaagcaaatatt
aatgttgaaactatgaattttgattgggagggttatggtatcccgcacgaggaggacgaa
gatgaaatcgtcttaagcattttaaaaaaggataaaacgcgctattttctaaaccacgct
tcaagctccaaaaaaaagctccacgatattgtccatggctttgccaaacatattagcacc
aaaggggcagatgagctaaaaaatagcaatattttaagaatcttagataactttatcgca
aaaaagcatagcgttcataaaagcacactgaccacttatgagagcgattttaaacaatta
tgcaccttaaaagagcagcttaaagagatagaatccaatgaagcaaatatcacgtcttta
aaagaatttgcggcatttgaaatcgctaaaattgaaaagattaatcctaaagagggtgag
tatgaggagcttttaaaccttaaaaaaatgctaagcaagcaagaaaagattaaagagcaa
ctcttaaaagtacgggaggtgctagaattaagccaaagttttgagggttttttgaatctt
gtggataagagctgtcctaatctcattgatggtttgagcgagtttgaggcgattgtggag
caagaagcagagcgaatggagaatcttgagctgatgaatgtagaggagctgcttgataaa
atcgcaggacttgccgagcttatccgcaaatttgggagtattacaaacgcgcttaactat
ttgcaagggcagaagcaaaagttagcccaatatgagcatttaagctttgataaacaagcc
ctacaaaagcagattcaagcccttgaggctacttgtgaagcaaatgctcaaaccctccat
cacaatcgccaaaaatgcgcaaaggatttaaacgcacggattgaacatctttgcacacag
ctgcgattaaagcaaagccatttgttgcttaaagaagtgcctttatatcaaaagggcata
agcgaatgtgaattaaggctaggggatagcgatgtgaatgtgatttcatcaggtgagtat
aatcgtttgcgtttggtgatgatgtgtattgatatggaattacagccacgtaaagggatt
ttagtgcttgatgagattgatgcgaatttgagtggggaggagagcgagggggtagcgcag
attctaaaaacactctcacgtgattatcaaatctttgccatctctcatcaaacgcatatg
ccctccctagctgataatcactatctggtggaaaaacgtgggcaaagtagcgttattaca
aagcttgattttgaaggcagggtgcaggaggtagcacggattattagcggctcaaatatc
acgccacaagcccttgaatttgctaggacacatcttagtaaatag
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