Helicobacter mastomyrinus: V3I05_04635
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Entry
V3I05_04635 CDS
T11030
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
hmy Helicobacter mastomyrinus
Pathway
hmy00550
Peptidoglycan biosynthesis
hmy01100
Metabolic pathways
hmy01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
hmy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
V3I05_04635 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
V3I05_04635 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hmy01011
]
V3I05_04635 (mrdA)
Enzymes [BR:
hmy01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
V3I05_04635 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
hmy01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
V3I05_04635 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
XAM18968
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All DBs
Position
928040..929824
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AA seq
594 aa
AA seq
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MNTRYAILVICMVIVWLIISIRLFVINVINHEYYEKFAEKNAIRTEVLLPMRGLIVDRNN
EPLAINELGFSVSLVPKIRDKSILEREIQHIVSFLPHLDKDNLLKLYEKNNHAYNHNPVE
LVHFVPYAQMLGIYAHLKRSSYVIVAANSKRFYPNESTASHVIGYVAKASNKDIQNNPLS
AYSKIIGKEGIEKTYNTYLQGEAGYRKSQINSLYKEVKLLQEDNVLKRNDLRLSLDLKLQ
ESIDAEFAQRSGAVIVMNVHNGEILAAGSYPEYNINYFVDGISHKNWQELIENVHKPLIN
KLVYGRYPPGSVIKMGMLLSFLEFANINENSVIQTPAFVEFGNRKFRDWKAGGHGSADAI
KAIRESVDVYFYILSQYTGIENMANVLKQMGIGRLTGVDIPNEVSGILPTPEWKLRRYGE
QWYTGDTITTSIGQGYFLSTPIQIARYTALIASGKLVTPHFAKDFNGEQAVFATKDVLND
VQKSKLNVLRKGMYQVCSMPGGTAYSRAQGSQVKLACKTGTAQVVGIPQDVQKRIKESEM
EYFHRSHAWITAFLPYENPQYAVTILIEHGGSGGSGAPVLVKIANKLKELGYVK
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgaatacacgttatgcaattcttgttatttgtatggtgatagtgtggcttatcatcagc
atacgtttgtttgttattaatgtgattaatcacgagtattatgaaaaatttgccgaaaaa
aatgccatcaggacagaagttttgctccctatgcgtggcttgattgtcgataggaacaat
gagcctttagccattaatgaactaggattttctgtatcattagtccctaagattcgagat
aaaagtattcttgagcgagaaatacaacatatcgtgtcatttctgccacatttggataaa
gataatcttttaaaactctacgaaaagaacaatcacgcctataatcacaatcctgtggaa
ttagtgcattttgtgccttatgcacaaatgctaggaatctacgcccatcttaaacgttcc
tcttatgtgattgtggcggcaaatagcaaaagattctatcctaatgaaagcaccgcctcc
cacgtaatcggctatgtggctaaggcaagcaataaagatattcaaaataatccattatca
gcatatagtaagattataggtaaagaaggtatagaaaaaacatataatacctacttacaa
ggtgaggctggatatagaaaatcacaaattaactctttgtataaagaagtgaaactatta
caagaagataatgtgcttaaacgcaatgatttgcggctttcacttgatttgaaactgcaa
gaaagtattgatgcagaatttgcacaacgttctggagcagttatagtaatgaatgtacac
aatggggagattctcgctgcaggtagttacccagaatataatattaattattttgttgat
ggtattagccataaaaattggcaggaattaatagaaaatgtgcataagcccctgattaat
aagctcgtatatggtcgctatccacccggctcggttattaaaatgggtatgttgcttagc
tttttagaatttgcaaatattaatgaaaactccgtgattcaaactccagcttttgttgaa
tttggaaatcgaaagttccgcgattggaaagcaggaggacacggcagtgctgatgcaatc
aaggcaattagagaatctgtagatgtatatttttatatcctctctcaatatacggggatt
gaaaatatggcaaatgtgcttaaacaaatgggtattggtaggcttacgggagtggatatt
cccaatgaggtaagtgggattctgcccacacctgaatggaaactaaggcgatatggagag
caatggtatacaggcgatacaattactacatcaataggacagggctattttctctccaca
cctatacagattgcgcgctataccgcccttatagcttctggtaagcttgtaacaccgcat
tttgctaaagatttcaatggagagcaagccgtatttgcgactaaagatgtgctcaacgat
gtgcaaaaatcaaaacttaatgttttgcgcaaaggtatgtatcaggtttgctctatgccg
ggtgggacagcatactcccgcgcacaaggctcacaagtaaagcttgcatgtaagacaggg
acagctcaagtagtgggtatccctcaagatgtgcaaaaacgtattaaagaatccgaaatg
gaatatttccatcgctctcacgcttggattactgcatttttaccctatgaaaatccacaa
tatgcagtaaccattctaatagaacacggtgggagtggtgggagtggcgcacctgtgctt
gtgaaaatcgcaaataagcttaaagagctaggctatgtcaaataa
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