Helicobacter mastomyrinus: V3I05_05055
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Entry
V3I05_05055 CDS
T11030
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
hmy Helicobacter mastomyrinus
Pathway
hmy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hmy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
V3I05_05055 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hmy03019
]
V3I05_05055 (groL)
03110 Chaperones and folding catalysts [BR:
hmy03110
]
V3I05_05055 (groL)
03029 Mitochondrial biogenesis [BR:
hmy03029
]
V3I05_05055 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hmy04147
]
V3I05_05055 (groL)
Enzymes [BR:
hmy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
V3I05_05055 (groL)
Messenger RNA biogenesis [BR:
hmy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
V3I05_05055 (groL)
Chaperones and folding catalysts [BR:
hmy03110
]
Heat shock proteins
HSP60 / Chaperonin
V3I05_05055 (groL)
Mitochondrial biogenesis [BR:
hmy03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
V3I05_05055 (groL)
Exosome [BR:
hmy04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
V3I05_05055 (groL)
Exosomal proteins of other body fluids (saliva and urine)
V3I05_05055 (groL)
Exosomal proteins of breast cancer cells
V3I05_05055 (groL)
Exosomal proteins of colorectal cancer cells
V3I05_05055 (groL)
Exosomal proteins of bladder cancer cells
V3I05_05055 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
XAM19045
LinkDB
All DBs
Position
complement(1008599..1010236)
Genome browser
AA seq
545 aa
AA seq
DB search
MASKEIHFSDSARNKLYEGIKQLSDAVKVTMGPKGRNVLIQKSYGAPAITKDGVSVAKEI
ELADPIANMGAQLVKEVASKTADAAGDGTTTATVLAYSIYKEGLRNITAGANPIEVKRGM
DKAVTAIVEELKKASKKVGGKSDIAQVATISANSDENIGALIAEAMEKVGKDGVITVEEA
KGINDELSVVEGMQFDRGYLSAYFVTNTDKMTAQLENAYVLLTDKKISNMKEILPLLEAT
MQSGKPLLIIAEDIEGEALTTLVVNKLRGVLNVSAVKAPGFGDRRKAMLQDIAILTGGQV
ISEELGKTLESATLADLGSAARIVIDKDNTTIVDGKGKTKDVKDRIAQIKMEIENTTSDY
DREKLQERLAKLSGGVAVIKVGAASEVEMKEKKDRVDDALSATKAAVDEGIVIGGGSALI
RASQKVKLKLEGDEAVGYDIIKRAIKAPLGQIAANAGYDAGVVVNEVEKNAKDGFGFNAA
TGEYVDMFKEGIIDPLKVTRVALQNAVSVSSLLLTTEATINEVKEDKPAPAMPDMGGMGG
MGGMM
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtaaagaaattcatttttcagattctgcaagaaataagttatatgagggcatt
aagcaattaagcgatgctgtaaaggtaacaatgggaccaaaagggcgtaatgtactgatt
caaaagagctatggcgcaccggctattacaaaagatggtgtttctgtggcaaaagagatt
gaattagccgatcctatcgctaatatgggcgcacagcttgtaaaagaagtagcgagtaag
acagctgatgcagccggtgatggtacgacaacagctaccgttttagcctatagtatttat
aaagaaggtttgcgaaacatcactgctggggcaaatcctatcgaggtaaaacgtggtatg
gataaagcagtaacggctatcgtagaggaattgaaaaaagcaagtaaaaaagtaggtggc
aagagcgacattgcccaagtggcgactatctctgcaaattccgatgaaaatatcggtgca
ctcattgctgaagcgatggaaaaagtaggcaaagatggcgttattactgttgaggaagca
aaggggattaatgatgagttaagcgtggttgaaggtatgcagtttgatagaggctacctc
tccgcatattttgtaactaatactgataagatgacagcacagcttgaaaacgcctatgtg
cttttaaccgataagaaaatctctaatatgaaagagattctgccattacttgaggcgact
atgcaaagtggcaaaccgcttttgattattgctgaagacatcgagggcgaggctcttacg
actttggtagtgaataaattgcgcggtgtgcttaatgtatcagcagttaaagctccgggc
tttggcgatagacgcaaggcaatgttacaagatatagccattcttaccggcggacaagtc
attagcgaggagcttggtaagactttagaatctgcgactttagcggatttaggaagtgcg
gcaagaattgtcattgataaagataatacgactatcgttgatggtaagggcaagacaaaa
gatgtcaaagatagaatcgcacaaatcaaaatggaaattgaaaacactacaagcgattat
gatagagaaaagctccaagagcgattggctaagcttagtggcggtgtagctgttatcaag
gtaggtgctgcaagtgaagtagagatgaaagagaaaaaggaccgcgtagatgatgcgctt
tctgcgacaaaagcagcagttgatgaaggtattgttattggtggtggctctgcgcttatc
cgtgcttcacaaaaagtaaaacttaagcttgagggtgatgaggcggttggctatgatatt
atcaaacgcgctattaaagcacctcttgggcaaattgccgcaaatgctggatatgatgcg
ggtgtggtagtcaatgaagtagaaaaaaatgcaaaagatggctttgggtttaacgctgct
acgggcgagtatgtggatatgtttaaagagggcattatcgatccgcttaaggttacgcgt
gtagcactgcaaaatgccgtctctgtatcaagcctcctgctcactacggaagcgactatt
aatgaagtcaaagaggacaaaccagctccagcaatgccagatatgggcggaatgggtggt
atgggcggtatgatgtaa
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