Helicobacter mastomyrinus: V3I05_05225
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Entry
V3I05_05225 CDS
T11030
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
hmy Helicobacter mastomyrinus
Brite
KEGG Orthology (KO) [BR:
hmy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hmy03009
]
V3I05_05225 (rimO)
Enzymes [BR:
hmy01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
V3I05_05225 (rimO)
Ribosome biogenesis [BR:
hmy03009
]
Prokaryotic type
ribosomal protein modification factors
V3I05_05225 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
NTPase_1
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
XAM19076
UniProt:
A0ABZ3F7A7
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All DBs
Position
1040796..1042151
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AA seq
451 aa
AA seq
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MRFKAQQSLHLISLGCTKNLVDSEVMLGRLQSYALTQELESADVIIINTCGFIESAKQES
IQTILHASSNRKKGALLVVSGCLSQRYANELKAEIPEIDIITGVSDYDKIDNMIAQRRGI
ASNKVFLADENDKRVIVGSSFHAYIKLSEGCNQQCSFCAIPQFKGKLHSRTLQSTLKELT
NLYNQGFRDFSFIAQDSSSYMRDLGQKDGLIRLIQAIDNLNLDISCRIFYLYPSTTSLQL
IESIAASKCFLPYFDMPIQHIADSMLRTMRRGADKAAHLELLRAMRAVPHSFIRTSLVLG
HPGEDEAAFTELCEFIESFGFDRINLFAYSPQEHTLAYKLPKVSAKITNTRINALNRIIK
AQQKALNKALVGQEVNIIVEGKSEISEYFYRARLVLWGRDIDGEILINDSEMCDKSGNML
PLSEGYYRAKVTAYKQNFLFGKVLAHLAHIS
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgcgttttaaagcacagcagagtctccacctcatctcacttggctgcacaaagaatctt
gtagattctgaagtaatgcttggacgattacaatcttatgccctcacgcaagagcttgag
agtgctgatgtaattatcattaatacttgcggttttatagaatctgccaagcaagagagt
atccaaactattctccacgcctcaagcaatcgcaaaaagggtgcattgcttgtggtaagc
ggctgcctctcgcaaagatatgctaatgaacttaaagcagaaataccagagattgatatt
atcacaggcgtgagcgattatgacaaaatcgataatatgatagctcaaaggcgcggcata
gcgtctaataaagtctttttggctgatgaaaacgataagcgcgtgattgtcggctcatct
tttcacgcttatattaaacttagcgagggttgcaatcaacaatgtagcttttgtgcaatt
ccacaatttaaaggcaaactccattcacgcacattgcaatccacactcaaagaattgaca
aatctctataatcaaggatttagagattttagttttatcgctcaagattctagctcatat
atgcgtgatttagggcaaaaagatgggcttatacggctcattcaggctattgataatctt
aaccttgatataagttgtaggattttttatctctaccccagcacgacttctttacaactc
atagaatctattgctgcctcaaagtgctttttaccatattttgatatgcccattcagcat
atcgcagattctatgctacgcacgatgagacgaggagcagataaagcggcacatttagaa
ctattaagggcgatgagggcagtgccacatagctttatccgcacaagccttgtgcttgga
caccccggcgaagatgaagcggcatttacagagttgtgcgagtttatagaatcttttggc
tttgataggattaatctctttgcctactcgccgcaagaacacaccctagcctataagcta
cctaaagtaagcgctaaaatcacaaatacccgtataaatgcccttaatcgcattatcaaa
gcgcagcaaaaggctctaaataaagctcttgtggggcaggaagtgaatattatcgtggag
ggtaaaagcgagataagcgagtatttttatagggcgcggcttgtgctgtggggcagggat
attgatggggagattctcatcaatgatagcgagatgtgtgataaaagtggcaatatgctg
cctttaagcgaaggatattaccgcgccaaagtcactgcatacaagcaaaacttccttttt
ggtaaagttcttgcgcatttagcgcatatttcctag
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