Helicobacter mastomyrinus: V3I05_05275
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Entry
V3I05_05275 CDS
T11030
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
hmy Helicobacter mastomyrinus
Brite
KEGG Orthology (KO) [BR:
hmy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hmy03016
]
V3I05_05275 (miaB)
Enzymes [BR:
hmy01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
V3I05_05275 (miaB)
Transfer RNA biogenesis [BR:
hmy03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
V3I05_05275 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Motif
Other DBs
NCBI-ProteinID:
XAM17106
LinkDB
All DBs
Position
complement(1051914..1053278)
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AA seq
454 aa
AA seq
DB search
MKLFIQTMGCAMNERDSAHMIAELQDKLQYTLTNNAKEADLILINTCSVREKPEKKLFSE
IGAFAKEKKQGAKIGVCGCSASHLGAEIIKKAPSVDFVLGARNVSKITQVLSRPKAVEVD
IDYDDSTYVFASPQTMGIKAMLNISIGCDKKCSYCIVPFTRGREISIPKDLLLTEAKKLV
QNGAKELLLLGQNVNHYGVRFSHPHPRTNFTDLLQELSQIDGLYRIRFTSPHPLHMDDEF
LEAFATNPKIAKGIHIPLQSGSSRILKMMKRGYDKQWYLSRIEKLKSLLPNVGIGTDIIV
GFPTESNADFADTMEVVKIVGFDTLYSFVYSPRPYTSAYSYDKSMQVPPEVAKERLAQLQ
NLHKDILRKKAQEEKGRVYEVLVENHRDDDMQCFSEGRTSHNKLIKIIGKALPIGAIVQT
KITHNEGGALMGEFIRELSLKEALEFNIRAANAK
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgaaattatttatccaaacgatgggttgtgcgatgaatgagcgtgattcagcacatatg
attgctgaattgcaggataaactgcaatatacccttacaaataatgccaaagaggcagat
ttgatactcattaatacctgctccgtgcgggaaaagcctgaaaaaaaactattttcagaa
attggagcatttgctaaagaaaaaaaacaaggtgcaaaaatcggtgtgtgtggttgcagc
gcgagccatctaggggcagagattattaaaaaagccccgagtgtggattttgtgctaggg
gcaagaaatgtctctaaaatcacgcaagtcctttctcgcccaaaggctgtggaagtggat
attgactatgatgatagcacatacgtctttgcttcgccccaaactatgggtattaaagca
atgcttaatatctctattggttgtgataaaaaatgcagctattgtatcgtgcctttcacg
cgaggcagggaaatctctatccccaaagatttgcttctcacagaggcaaaaaaacttgtg
caaaatggcgcaaaagagctattgcttttaggacagaatgttaatcattatggcgtgaga
ttttcccaccctcaccctaggacaaactttactgatttattacaggagttaagccagatt
gatggattgtatagaattcgctttacctcgcctcacccgctacatatggacgatgaattt
ttagaagcatttgctactaatcctaaaattgctaagggcatacatatccctttacaaagt
ggctctagcaggattcttaaaatgatgaagcgtggatatgataagcaatggtatctctca
cggatagaaaagcttaaatcacttctgcctaatgtcggtataggcacggatattatcgta
ggatttcccacagaatccaatgcagattttgcagatacaatggaggtggtaaaaatcgta
ggctttgatacgctatatagctttgtatattcgccacgtccgtacacaagtgcatatagt
tatgataaaagtatgcaagttccacccgaagtagcaaaggagcgtctagcgcaattacag
aatcttcataaagacatcttacgtaaaaaggcgcaggaggaaaaagggcgtgtatatgaa
gtgctagtagaaaatcaccgtgatgatgatatgcagtgctttagcgaggggcgcacaagc
cataataaacttattaaaatcataggcaaagccctgcctatcggggctatcgtgcagaca
aagattacacataatgagggcggggcgttaatgggtgaatttataagagagcttagtctt
aaggaagctttagagtttaatataagggcggctaatgctaagtag
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