Helicobacter mastomyrinus: V3I05_05850
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Entry
V3I05_05850 CDS
T11030
Name
(GenBank) lipid A deacylase LpxR family protein
KO
K09953
lipid A 3-O-deacylase [EC:3.1.1.-]
Organism
hmy Helicobacter mastomyrinus
Pathway
hmy00540
Lipopolysaccharide biosynthesis
hmy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hmy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
V3I05_05850
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hmy01005
]
V3I05_05850
Lipopolysaccharide biosynthesis proteins [BR:
hmy01005
]
Lipid A
V3I05_05850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxR
Motif
Other DBs
NCBI-ProteinID:
XAM17213
LinkDB
All DBs
Position
complement(1157201..1158214)
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AA seq
337 aa
AA seq
DB search
MSPKYMLIYLSAISRVRHIALLLLLPFIAFCESDFKKDKHHILSVVSENDVYFEDFIRSD
KYYTAGHYLSYTSKEFDNSFLNKMKLFSYLSKHSFARLNVSLSQEIYTPANKSATKPSSD
DMLYGAAILASFSSINRTRNFMEQLGVDIGLAGPLALGEQIQNSVHKLTGKNPSRGWDTQ
IKNEFLLNLHYGIIYPLKLIDNVFDILPQGQFFLGNTYTAISAGARLRIGYGIKNDFGIQ
KYKSKMSQVIVNNGLKIYALAGVNGSIVGRDIFIEGNTFKGVKSHLNLERTLYEYELGVA
IGYKNISLSYLFTRGSKKFKEQDEFHSYGSLRLDMSF
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcctaaatatatgctaatctatttatctgctatatcgagggtaagacatattgca
ttgttgcttttgcttccatttattgcattttgtgaaagtgattttaaaaaagataaacat
catatactaagtgtggtgagcgaaaatgacgtctatttcgaggatttcatacgttctgat
aaatattatacagcgggacattacctaagctatacaagcaaagaatttgataatagtttt
ttgaataaaatgaaattattttcatatttgtctaagcattcttttgcacgattgaatgta
tcgcttagccaagaaatctatacccccgcaaataaatctgccaccaagccatcaagtgat
gatatgctctatggagcagcaatccttgcttcttttagctctatcaataggactagaaat
tttatggagcagcttggcgttgatatagggctagctggtcctcttgcattaggagagcaa
atccaaaatagcgtccataaacttacgggtaaaaatccctcacgtggctgggatacacaa
ataaaaaatgaatttttacttaatttgcattatggaattatttatcctttgaaacttata
gacaatgtttttgatattttgccacaggggcaattttttttggggaatacttacaccgcc
ataagtgctggagcaagattgcgtataggatatggcataaaaaacgactttggaatccaa
aaatataaatctaaaatgtctcaagtgatagttaataacgggctaaaaatatatgcttta
gcaggagtgaatggctctattgtgggacgtgatatatttatagagggcaatacctttaaa
ggggtgaaaagccacctcaatttagagcgcactctatatgaatatgagctaggagtggca
ataggatataaaaatatctcgcttagctatctcttcactaggggtagcaagaaatttaaa
gagcaagacgagtttcatagctatggttctttaaggctagatatgagcttttag
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