Helicobacter mastomyrinus: V3I05_05980
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Entry
V3I05_05980 CDS
T11030
Symbol
trmA
Name
(GenBank) tRNA (uridine(54)-C5)-methyltransferase TrmA
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
hmy Helicobacter mastomyrinus
Brite
KEGG Orthology (KO) [BR:
hmy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hmy03016
]
V3I05_05980 (trmA)
Enzymes [BR:
hmy01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
V3I05_05980 (trmA)
Transfer RNA biogenesis [BR:
hmy03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
V3I05_05980 (trmA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_15
Methyltransf_25
RrnaAD
Methyltransf_4
NodS
TRM5-TYW2_MTfase
Methyltransf_12
Cons_hypoth95
Motif
Other DBs
NCBI-ProteinID:
XAM17239
UniProt:
A0ABZ3F5C7
LinkDB
All DBs
Position
complement(1185642..1186805)
Genome browser
AA seq
387 aa
AA seq
DB search
MECAHFGICGGCNNTALSYKQQFEGKIAQTTQEFYPLLNKQNVRIESFDSLESGFRARAE
WRIYHDNGTMHFAMSALESAHKVPITQCPILLPILQSLFPLLLDILQHNQILHHKLYACN
LLCSMQDEVIITLIYHKHLDSLWEEAAQKAQYRLTKALNVPLHIVGRSKNQKCVLGKTYI
CESLSLLNGTYHYQYFKQEGAFSQPNPLINLKMLEFVASSLQKLYPKPICDALEIYCGSG
NFTLILSAFFRKVLATEVVKSAIALLKDNMTQNHITNITPVRLNARESIQALCGERAFFR
LKDVDIASFNIECVLIDPPRSGVGDKAILAFLQRFPSIIYISCNPSTLTQDLSILLQTHS
IARFGLFDQFPYTHHRECVVILRKNLL
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggaatgtgcgcattttggcatttgtggcgggtgtaataacactgccttaagctataag
cagcagtttgaaggcaaaattgcgcaaaccacacaggaattttaccccttactcaataaa
caaaatgtgaggattgaaagctttgattctctagagagtggctttcgcgctcgtgcggaa
tggcggatttatcacgataatggcacaatgcactttgcaatgagtgccttagaatctgcc
cataaagtccccattacacaatgcccgattttactccccattttgcaaagcctcttccca
ctcctgcttgatatattacaacacaatcaaatccttcatcacaagctttatgcgtgtaat
ctgctgtgcagtatgcaagatgaggtgattatcacactcatttatcataagcatttagat
tctctatgggaagaagcggcacaaaaagcgcaatataggcttacaaaagcactcaatgtg
ccattgcatatcgttggacgcagcaaaaatcaaaagtgtgtattaggcaaaacttatata
tgtgaatctctaagtctcttgaatggcacttatcattatcaatattttaagcaagaggga
gcttttagtcaaccaaacccgcttattaatcttaaaatgcttgaatttgtcgcctcatcg
ctgcaaaaactctatcctaagcctatttgcgatgctttggagatttattgtgggagtggg
aatttcactttgatattgtctgcattttttagaaaggtgttagccacagaagtagtaaaa
tccgctatcgccctgcttaaagacaatatgacacaaaatcatattacaaacattaccccc
gtgcggcttaatgcgcgtgaaagtatacaagctttatgtggggaacgtgccttttttcgc
cttaaagatgtggatattgcatcttttaatattgagtgtgtgctaatcgacccacctcgc
agcggtgtaggtgataaagcaattttagcatttttacaacgttttcctagcattatctac
atttcgtgcaatcctagcactctcacacaagatttatctatccttttacaaacgcatagt
attgcgcgatttgggctttttgaccaattcccttatacacatcatagggaatgtgtagtg
attttgcgcaaaaatcttttatag
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