Helicobacter mastomyrinus: V3I05_06295
Help
Entry
V3I05_06295 CDS
T11030
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
hmy Helicobacter mastomyrinus
Pathway
hmy02024
Quorum sensing
hmy03060
Protein export
hmy03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
hmy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
V3I05_06295 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
V3I05_06295 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
V3I05_06295 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
hmy02044
]
V3I05_06295 (ffh)
Enzymes [BR:
hmy01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
V3I05_06295 (ffh)
Secretion system [BR:
hmy02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
V3I05_06295 (ffh)
Eukaryotic Sec-SRP protein
V3I05_06295 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
CbiA
SRP54_N
AAA_31
AAA_22
Fer4_NifH
AAA_30
ArsA_ATPase
nSTAND3
Zeta_toxin
ResIII
AAA_33
6PF2K
ParA
APS_kinase
AAA_14
NPHP3_N
AAA_16
AAA_24
MeaB
AAA_19
MobB
Thymidylate_kin
KTI12
T3S_SPI-1_N0
DUF4230
NACHT
MipZ
ATP_bind_1
CoA_binding_2
ABC_tran
CopB
Motif
Other DBs
NCBI-ProteinID:
XAM17295
UniProt:
A0ABZ3F3L3
LinkDB
All DBs
Position
complement(1246119..1247462)
Genome browser
AA seq
447 aa
AA seq
DB search
MFDTLTSSFKSIMNKIRFSDDEKALQRACEELKKTLLKNDVYHKATKHIVQVVQEHTKQA
GIGKQSFSAALQHALADILQSSKGYGISFSPTPPSVIVMVGLQGSGKTTSSAKLALYLKQ
RGKKVLLVACDLHRLAAIEQLSQLAQSIEVDIFTPNLASKPNDAICVAKEARQKAVAGHY
DVVIVDSAGRLAIDEALMNELAAVKKAINATECLYVADSLSGQDGIRSAGHFNEKIGIDG
VILSKFDSDTKGGIALSIAYQIGIPLKFIGSGEKVADFDVFLPDRIISRLMGVGDIVSLA
EKTASVISQDEAKQITKKLKKGQFSFEDFIAQIENVKKLGSMSQIVSMIPGLGNMASALK
DVDLDKSSEVKNIRAMVNSMTKKERENPSLLNGSRRKRIALGSGLEVSDINRIIKQFDQA
SKMAKKLTQKGSMQELMSMMGNLKMPK
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacaccctgacaagctcgtttaagagcattatgaataagattcgctttagcgat
gatgagaaggcattgcaaagagcatgtgaggagctaaaaaagacattgcttaaaaatgat
gtctatcataaggctacaaaacatatcgtgcaagtcgtgcaagagcacacaaaacaagca
ggtataggcaaacagagctttagtgccgctctgcaacacgccctagcagatattttgcaa
tcatcaaaaggctatggcattagcttttcccccactccgccaagtgtgattgtgatggtg
ggcttacaaggaagcggtaaaaccacttcgagtgctaaactcgcgctttatttgaagcaa
agaggtaaaaaagtgctgcttgtagcttgtgatttgcaccgtttagcggctatcgagcag
cttagccaactcgcccaaagcatagaagtagatattttcacgcccaatcttgcaagtaag
ccaaatgacgcgatttgcgtagctaaagaagcgagacaaaaagctgtagcgggacattat
gatgtagtgattgtcgatagtgctgggcgattggctattgatgaagcattaatgaatgaa
ttagccgcagtaaaaaaagcaataaatgccacagaatgcctctatgtagcagattcacta
agtgggcaagatggtatccgctctgcgggacattttaatgaaaaaattggcattgatggt
gtgatactctctaaatttgatagcgatacaaaaggcggtatagccctctccatcgcttat
caaatcggtattccactcaaattcataggaagcggagaaaaggtcgctgattttgatgtt
ttcttgcctgatagaatcatatcgcgccttatgggagtaggagatatagtctccttagca
gaaaaaacagcaagtgtgataagccaagatgaagctaagcaaattaccaaaaagctcaag
aaggggcagtttagctttgaggactttatcgcacaaattgaaaatgttaaaaagcttggc
tcgatgagccaaattgtctctatgatacccgggcttggcaatatggcaagtgcattaaaa
gatgtggatttagataaatcaagtgaggtgaaaaatatccgtgctatggtcaattctatg
acaaaaaaagaacgtgagaatcctagcctactcaatggttcaaggcgcaaaaggatagca
cttgggagcggactagaggtaagcgatataaatcgtatcattaagcagtttgaccaagct
tccaaaatggcaaaaaagcttacccaaaagggcagtatgcaagaacttatgagtatgatg
ggaaatttaaaaatgccaaaataa
DBGET
integrated database retrieval system
