Helicobacter mastomyrinus: V3I05_06395
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Entry
V3I05_06395 CDS
T11030
Name
(GenBank) PBP1A family penicillin-binding protein
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
hmy Helicobacter mastomyrinus
Pathway
hmy00550
Peptidoglycan biosynthesis
hmy01100
Metabolic pathways
hmy01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
hmy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
V3I05_06395
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
V3I05_06395
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
hmy01003
]
V3I05_06395
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hmy01011
]
V3I05_06395
Enzymes [BR:
hmy01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
V3I05_06395
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
V3I05_06395
Glycosyltransferases [BR:
hmy01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
V3I05_06395
Peptidoglycan biosynthesis and degradation proteins [BR:
hmy01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
V3I05_06395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
XAM17314
LinkDB
All DBs
Position
complement(1269228..1271234)
Genome browser
AA seq
668 aa
AA seq
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MWRGIKYSFFVLSVALGIGVCAYLIKLFYDVETEVNKIKNYRFSFASQIVDRKDRLIANV
FTDENFRFYATFDEIPPRVIESLLAVEDTLFFEHIGINPDAISRAMLKNIKSMRYVEGGS
TLTQQLIKNIILSPEKTLKRKLTEVMLAIHIERHLSKEKILELYLNRISFGHGYHGIKTA
ALGYFHKTLNELTLKEICMLVGLPKAPSFYDPTKNKEYSIARANDIIDRLYDIGWISKEE
QQSALNEVPEVYNQTLTQNVAPYVVDEVLRELAHIEDLKTGGYYIKLNIDLDYQFAAQEA
LIYGYEQINKRLIERYPKTFTDFDFSNDTLNGAMVVTDTHTGDILALVGGVDYVKNKFNR
ATQAKRQLGSSIKPFIYQSAFDKGESPATFVPDVPRKFVTKGAAEVASDDTQESEAEEWR
PSNYTTRFNGFMTLKDALRTSSNLATINLVDQNIGFSKVYQALKNDGFENLPENMSIVLG
SFELSPLQAARQYSLFSNYGTILKPALIESVINKSGENIYSSPRESRHITTAAQAFLTID
ILRDVVNRGTGARARMNGLEVAGKTGTSNRNIDAWFCGFTPDVQAIVWYGRDDNTPIGPH
ESGGIVAPPAFAYFFSKVLTFDPGITRKFQIPEGVKFKTLDYGDFYYTDNSPLPVKKPIA
NIEEELLF
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgtggcggggtataaagtatagtttttttgtgctttctgttgctctgggtataggcgta
tgcgcctatcttatcaagcttttttatgatgtagaaaccgaagtgaataagattaaaaac
tatcgtttttcatttgcctcacaaatcgtagatagaaaagataggctgattgctaatgtt
tttactgatgaaaattttagattctatgctacttttgatgaaattcccccacgtgtgata
gaatctctgcttgccgtagaagatacattattttttgaacatattggtatcaatcccgat
gctatatcgcgcgctatgctcaaaaacattaagagtatgcgctatgttgaaggtggaagc
actctcacacagcagcttattaaaaatatcattctaagtcctgaaaaaacattgaagcgc
aaactcacagaagtaatgcttgccatccatattgagcggcatttgagcaaggaaaaaatc
ttagagctttatcttaatcgcatttcatttggacacggctatcacggtatcaaaacggct
gcattagggtattttcacaaaaccctaaatgaattaacgctcaaagaaatctgtatgctt
gtaggtctgcccaaagccccaagcttctatgacccaactaaaaataaagaatattcaata
gcaagggcaaatgatattattgataggctctatgatattggttggattagcaaagaagag
cagcaaagtgcgctcaatgaggtgccagaggtatataatcaaacacttacgcaaaatgta
gctccttatgttgtagatgaagttttgcgtgaattagcacatattgaggatttaaagaca
ggcggatattatattaagctcaatattgaccttgactatcagtttgccgcacaagaagct
cttatttatggctatgagcaaatcaataaacgtcttatagaacgctatcctaaaacattt
acagattttgattttagcaatgacacacttaatggggcaatggtggttacagatacgcat
acaggcgatatactcgcacttgtaggtggggtagattatgtgaaaaataaatttaatcgt
gccacacaagctaaaagacagcttggtagctctatcaagccctttatctatcaaagtgca
tttgataagggtgagtctccggctacttttgtgccagatgtgccacgtaaatttgttacc
aaaggcgcagcagaagtagcaagtgatgacacacaagaaagtgaagccgaagaatggcgc
ccatcaaactatacaacaagattcaatggctttatgacacttaaagacgcgctccgcaca
tcaagcaatcttgctacgattaatcttgtggatcaaaatatcggcttcagtaaggtgtat
caagcccttaaaaatgatggttttgagaatctccctgaaaatatgtctatcgtacttgga
agctttgagctctcaccccttcaagcagcacggcaatactctttgttttcaaattatggt
actatccttaaacccgctcttatagaatctgtgataaacaaaagtggggagaatatatat
agctcccctagagaatctcgccatatcaccactgcagcccaagcgtttctaacaattgat
attttacgcgatgtggttaatcgcggcacaggcgcaagagctagaatgaatggcttagaa
gtcgcaggtaaaacaggcacatcaaatcgcaatatagatgcgtggttttgtggctttacc
cctgatgtacaggctatcgtgtggtatggacgtgatgataatacacccataggaccacac
gaatctggcggtattgtggctcctccagcatttgcatattttttctctaaagtgcttacc
tttgacccgggcatcacacgtaaattccaaattcctgagggcgtgaaattcaaaaccctt
gattatggggatttttactatacagataattcacccttaccggttaaaaagcctattgcc
aatattgaagaagaacttttattctag
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