KEGG   Helicobacter mastomyrinus: V3I05_06675
Entry
V3I05_06675       CDS       T11030                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
hmy  Helicobacter mastomyrinus
Brite
KEGG Orthology (KO) [BR:hmy00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hmy02044]
    V3I05_06675 (tssC)
Secretion system [BR:hmy02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   V3I05_06675 (tssC)
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: XAM17368
UniProt: A0ABZ3F2K1
LinkDB
Position
1316458..1317930
AA seq 490 aa
MSGTSANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVAEFITEIVKTDSAENKINK
YTLDEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQ
EALEDFEANPDITTTTLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIA
AMSHAPFLTSMSASFFGLDSYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTR
FLTRSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPK
AGGAVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSAN
AALKPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENG
LNEWMRQYVSDQENPPAEVRSRRPFRGAKVFVSEIEGEAGWYRINLNVRPHFKFMGANFE
LSLVGKLDRE
NT seq 1473 nt   +upstreamnt  +downstreamnt
atgagtggtacatcagcaaatacgcaaacttcaataaaagagctatctatcattgatagc
ataatgcagacaagtagatattcaaaggaagatgaaagttataatattgccaaaatgggt
gtggcggaatttatcacagaaatagtcaaaactgatagtgcagaaaataaaatcaacaaa
tacacgcttgatgaaatgatagcacatattgatgatattatttcacgtcaaatggacgag
atattacataatgaacagattcagcaattagaatctacatggagaggtttatatttttta
gtagaacgcactaattttcaagaaaatataaaaattaatttgtttgatgtaactaaacaa
gaggctttagaggattttgaggcaaatccagatattacaacaactacattatataaacgt
atttattcttctgaatatggacaatttggtggcgagccggtaggtgcaattttgggtgat
tatgccttgaatgcttctacgcctgatatgaattttctctctaagatgtcttctattgcg
gctatgagccatgctccatttttaacttctatgagtgctagtttttttggacttgatagt
tatgcggagcttcccaagatacaagatttaaaagcacttttagagggtccgcaatatgta
aaatggcgcacttttagggaaaatgaagattctaagtatgctggtttattggttacacgt
tttcttactcgatctccttatgagccacaagaaaatcctataaagaaatttaattacaag
gaaaatgtgcataactcgcataatcacttgctatggggaaatactatttatgcttttgct
acgcgattgactgatagtttcgcaaattatcgctggtgtggaaatattataggacctaag
gctggcggtgctgtaaaagatttgcctacttatatttatgaaagctttggcactacgcaa
tccaagataccaacggaggtgcttatcacagatagatgtgagtatgagcttgcagaatct
ggctttatagcctttacgttgcgacgtgatagcaataatgcagtatttttctccgcaaat
gcggcattaaagccaaaaatttttccaaatacgcctgaaggaaaagaggcagagacaaat
tataggcttggcacacagttgccttatatatttttagtttctcgccttgctcattatctt
aaggtattacaaagagaagaaattgggagctggaaagaaagggcagatatagagaatggc
ttaaacgaatggatgaggcaatatgtttcagaccaagaaaatcctcccgcagaggttcga
agtaggcgaccatttagaggtgctaaggtttttgtaagcgagatagaaggggaagcaggt
tggtatagaataaacttaaatgtacgaccccactttaaatttatgggagcaaactttgaa
ctttctttggtggggaaacttgacagagaataa

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